Detail



ID : Ahg488510

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488510|fgenesh2_kg.6__1644__AT5G16540.1
Sequence
GAGAGAAGAG AACGCTATAC TTTCTTCTGC TTTCTCTCTC TAGACGTGTT TCTCTATGTC TTCCTCCATT GTCATTACCT CTAAACTCTC CACAATCGGA GGAAGACGAT TCGTGGGAGG AAGAGAAACG ATGGGATTTC CCGTCGGAAA ATCTCTAGAG TGAGAAGAAT TATGGCGTGT CTTAATGCTT AATACTCACG GACGCAGCCA TTGTTCGTCA TCATCTCCAT GGATTTTGAT TCCAGAGTTC CCATTTCACG GGAAAGCACT TCTCTTTCCA CGTTGCTTAA CCAAGATGCA ATGTGGCAAA TGAACTTGGG ATCAGATGAT ACAATGGGTC TTGATGGGTC TTATCCGGAA CGTCACGGAG AGCCAGATTG TGCTTATTAC ATAAGGACTG GACTTTGTAG GTTTGGTTCT ACTTGCCGAT TCAATCATCC CCACGACCGG AAACTGGTTA TAGCAACAGC AAGGATTAAA GGAGAATACC CTGAAAGAAT TGGGCAGCCT GAATGTGAGT TTTATCTTAA AACAGGAACC TGCAAATTCG GAGTGACTTG CAAGTTTCAT CATCCTAGGA ACAAAGCTGG GATTGATGGA AGTGTATCAG TTAATGTCTT AGGCTATCCT CTACGTCCAA ACGAAGATGA TTGTTCTTAC TTTTTGAGAA CTGGGCACTG TAAATTTGGG GGAACTTGTA AATTCAATCA CCCTCAGACT CAATCAACCA ACTTGATGGT TTCTCTTCGT GGCTCTCCGG TTTACTCTGC TCTTCAACCT CCAACTGATG GTCAACAGTC TTATTCTTGG CCGAGAACAT CTTTTGTTGC AAACCCTCCT CGTTGGCAAG ATCCTTCTAG TTTCTCTTCA GGATCTCAAG GAGGTCTCTT CTCATCCGGG TTTCATTCAG GAAACTCTGT TCCGCTCGGG TTCTATGCAT TACCTAGAGA GAATGTATTC CCAGAAAGAC CAGGCCAACC TGAATGTCAA TTCTACATGA AGACAGGAGA TTGCAAATTT GGAACAGTCT GCAAATTTCA TCATCCAAGA GACAGACAAA CCCCTGCTCC TGATTGTGTC TTAAGCTCTG TTGGCCTCCC TTTACGCCAG GGAGAACCAC TGTGCGTGTT CTATTCGCGG TATGGGATCT GCAAGTTTGG TCCAAGCTGT AAATTTGATC ACCCGATGCG AGTCTTCACT TACAACAACA ATGATGCATC TCCTTCTCCT TCATCATCTT CGCATCAAGA GACTGCCATC ACCACACAGC TCAGGAATCT CATAGTCTCT TCTTCAGTGG AAGCAACACC CACAACACTC CCTGAAACAA CCTCTGCTAA AGAAACCATT GTTCATGCAC AACACTGAAA CCACTTTGTT TTGTCTGTCT TGAACAACAT TTAACATTTG TTTTGTTTTA TCTCGTAAAC ATTTATGTAC AGAGATGAGA AATTAACTTC TGATCTGATT CGCCTTTTGT TGTAATTTTC 
Length1490
Protein Sequence
Protein Residue
Map Locationscaffold_6: 6442467.. 6444709
Download Sequence
A.thaliana
AGI-codeAT5G16540.1
Descriptionzinc finger nuclease 3
TAIR curator summaryEncodes a zinc finger protein.
Alias[ZFN3][zinc finger nuclease 3]
Gene coexpression
MR
MR Locus Description
15.8745 Ahg480993 ATP binding microtubule motor family protein
29.7658 Ahg950227
33.3167 Ahg490089 tRNA synthetase class I (I, L, M and V) family protein
37.4967 Ahg943398
38.223 Ahg921636 TCP-1/cpn60 chaperonin family protein
39.95 Ahg476761 HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain
40.4969 Ahg491980
47.1063 Ahg941921
61.1637 Ahg940352 SNF1-related protein kinase 2.1
61.7738 Ahg948204 Chlorophyll A-B binding family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression