| Annotation |
|---|
| Description | jgi|Araly1|488541|fgenesh2_kg.6__1675__AT5G16820.1 |
| Sequence |
TTTTCTTCGG CTTGAAGGGA AAAGATCAAA GATTGGGTCT TTAACACTTG AGAGAGTTTG AGCTCGCGAA GAACGGAAGA AATTTTCAGG ATCAATCAAC CGATCAAGCT TTGGTGAACT AACTCTTGCT TTTTCATTCG TAGTTATGGA ACCGGTTCCC GAATCCGTAC CCTCGCCGAA CTCGACTACG TCATCTATAC CACCGCCGGT GAACTCCGTG CCGCCTTTCT TGAGCAAAAC CTACGACATG GTTGATGATC CGTTGACCAA TGAGGTCGTG TCTTGGAGCA GCGGGAACAA CAGCTTCGTC GTCTGGAGTG TCCCCGAGTT CTCGAAGGTG CTCTTACCCA AGTATTTCAA GCACAACAAT TTCTCCAGCT TCGTCAGACA GTTAAATACT TATGGTTTCA GAAAAGTTGA TCCAGATCGA TGGGAATTTG CAAATGAGGG ATTTCTTAGA GGCCAAAAAC AACTACTCAA GAGTATTGTT AGGAGAAAAC CTTCGCATGT GCAGCAGAAT CAGCAACAAA CTCAAGTTCA GAGCTCATCT GTTGGTGCTT GTGTCGAGGT GGGGAAGTTT GGAATAGAAG AAGAAGTGGA TAGACTTAAG CGGGATAAGA ATGTTCTTAT GCAAGAACTC GTCAGGTTAA GGCAGCAACA GCAAGCTACC GAAAACCAAC TGCAGAATGT GGGACAGAAA GTTCAGGTGA TGGAGCAGAG GCAACAACAA ATGATGTCGT TTTTAGCAAA GGCTGTTCAA AGTCCAGGTT TCTTAAACCA GTTAGTACAA CAGAATAATG ATGGCAACAG ACAAATTCCA GGAAGCAACA AAAAGAGGAG ACTTCCTGTT GATGAACAGG AGAACTGTGG GGACCATGTG GCTAATGGTC TTAACCGTCA GATTGTTAGA TATCAGCCGT CGATAAACGA AGCAGCCCAA ACTATGCTTA GACAGTTCTT AAATACTAGT ACCTCACCTC GGTATGAATC AGTTTCAAAC AATCCTGACA GTTTCCTATT GGGTGATGTT CCCAGTTCTA ACTCTGTAGA CAATGGGAAC CTTTCAAATA GAGTTTCTGG AGTAACACTG GCCGAGGTTT CACCCAACGC AGCTCACTCA GCAACGAATC AAGTACCCGA AGCAGGTTTG GCTCAGCATC CTCAAGCTAG TCTGGTTCAT CCAAATTTAG GTCCAAGTCC GTCTCAAGGA GTAGCACCTG CAGCCTCTTG GAGCCCTGAA TCTGATTTAG TTGGATGTGA GACGGGCAAT GGAGAGTGTT TCGATCCAAT AATGGCTGTT TTAGATGCAA TTTCTCCTGA AGGCGAGGGC GAGATGGATG AGTTACTGGA TGGAGTCCCT AAGCTGCCCG GAGTCCAAGA TCCATTCTGG GTACAGTTCT TTTCTGATGA AAGCCCAGCG ATGGCAGATA CAGACGAGAT TCTATCAGGA TCAGTGGAGA ATAATGACAT GGTAATGGAA CAAGAACCAA ACGAGTGGAC CCGGAATCAA CAACAAATGA ATTATCTTTC TGAACAAATG GGACTTCTTT CCTCAGAAGC ACAGAGGAAA TAAAGATTTT CAGGGGAAGT TGTGAAAGGA GATATGAAGG AAGGAGGAAT ATATGGTGTT GATACCCTTC ACATTTTTAC TTAAAAAAAA AAAAAAAAGA GATAGAAGAA ACGTAAAAGA TTTACTACCA TGCTTGTGAA TAAAAGTAGA GATCGTTTTT TGTGTTGTTT CTTTCTATTA TACTTTTGTG TGAAAACGTT CGTCGTGTTC AATTAT |
| Length | 1786 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 6605584.. 6608114 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G16820.1 |
| Description | heat shock factor 3 |
| TAIR curator summary | Encodes a putative transcription factor whose expression is not induced by heat but whose stable overexpression leads to expression of HSP. Required early in the stress response for transient expression of heat shock genes. |
| Alias | [ATHSF3][ATHSFA1B][HSF3][HSFA1B][ARABIDOPSIS HEAT SHOCK FACTOR 3][ARABIDOPSIS THALIANA CLASS A HEAT SHOCK FACTOR 1B][heat shock factor 3][CLASS A HEAT SHOCK FACTOR 1B] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg478080 | Protein of unknown function (DUF3755) |
| 3.4641 |
Ahg318122 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| 7.2111 |
Ahg358554 | |
| 18.9737 |
Ahg488294 | Transducin/WD40 repeat-like superfamily protein |
| 21.6333 |
Ahg492146 | Sucrase/ferredoxin-like family protein |
| 22 |
Ahg347545 | |
| 30.3974 |
Ahg472398 | wound-responsive family protein |
| 30.9839 |
Ahg492316 | RNA polymerase III RPC4 |
| 32.4037 |
Ahg949330 | Small nuclear ribonucleoprotein family protein |
| 32.4037 |
Ahg490773 | TLD-domain containing nucleolar protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|