| Annotation |
|---|
| Description | jgi|Araly1|488825|fgenesh2_kg.6__1959__AT5G19390.1 |
| Sequence |
CGTGACTTCT CCGACACTCA TGACCCATCC ATCCACTCTC TCTCTCATAA CACAGCAGAA CGTACGACGG AAGAACCAGA GAGAGCTTTC TGCGACGGCT TTAATGGTGG GTGAATTGTT TGTTGCTGTT TTCGTTTTCT ATTGTTTGTA ACGAAAGAGG GTGAAATTGA AACCCTAGCG TTTCGAATTT AGTTGGGTTT GGTTACGAGT CTGGATCTGA GATTATGCTG TTGAGGCAAT GGAGGCTTCT TTAACGGCTT TGGAGCGGCC ACGAGGTGCA GCTTCAAATA CGGTTTTCAA GAGTGGTCCA CTTTTCATAT CATCTAAAGG ATTGGGTTGG ACGTCTTGGA AGAAACGCTG GTTCATCCTC ACACGTACTT CTTTGGTTTT CTTCAAAAAT GACCCTGGTA CACTACCACA AAAGGGTGGT GAAGTTAACT TAACTCTGGG TGGCATCGAC TTGAATAACT CTGGAAGTGT TGTGGTGAGA GAGGATAAAA AATTGTTGAC GGTATTATTT CCAGATGGGC GTGATGGGAG AGCTTTCACT CTTAAGGCTG AGACATTTGA AGATTTGTAC GAGTGGAAAA CTGCTCTTGA GCAGGCTCTT GCACAAGCCC CTAATGCAGC ACTTATCATG GGTCAAAATG GAATATTCCG TGCTGAAACT AACGAGGCTA TCGAAGGGCG GGATAAGCGT CCATTGAAAT CCTTGGTTGT TGGAAGACCA ATTTTACTTG CTCTCGAAGA TATTGATGGA AGCCCATCAT TCCTTGAGAA AGCTCTTCAG TTTATTGAGA AGTATGGAAC TAAAATTGAA GGAATATTAA GACAGTCTGC TGATGTGGAG GAGGTGGAAC GTAGAGTTCA AGAATATGAA CAGGGCAAAA CAGAGTTCAC ATTTGATGAA GATCCGCATG TTGTTGGAGA CTGCATTAAG CACGTATTGA GGGAGTTGCC TTCTTCTCCG GTTTCAGCAT CTTGTTGTAC TGCCCTGCTG GAAGCTTACA GAATCGAGTC TAAGGAGGCT CGCATTAGTT CATTGCGCTC TGCTATAGCG GAAACATTTC CGGAACCTAA TAGACGTCTA CTACAACGGA TTCTGAAAAT GATGCATACT ATCTCGTCTC ATTCCCACGA AAATCGAATG AACCCAAATG CTGTAGCTGC TTGCATGGCT CCTCTGCTCC TACGTCCTCT ACTGGCTGGT GAATGTGATT TAGAGGACGA TTTTGATAGC GGTGAAGACA ATTCTGCTCA GCTTCTTGCT GCTGCTAATG CTGCCAATAA TGCTCAAGCC ATCATTACAG TTCTCCTGGA GGATTATGGA AGTATTTTCG ATGAAGAAAA TATTCAAAGA TGTTCTATTT CGACTGAATC ACATATTGGA AATAGTGGGC CTGATGATTC AAGTGATGAT GACAACAACG TGAAAAATGA ATATCACAAT GCAGATAATG AAGTTGAACC AGTGACAGAT GACGATAATG AACGTGCATT GAGTGGAAAA ATGAGTGAGA GCAGCGGTTG CACAGGCAGT GATCTCTATG AGTACAAGGG ATTTGTTGCT GATGACTCTG ATATCGAATC ACCAAGAGAC ACAAATGGTC CAAGATGTAA TTCAAACATA CGAACAGATC ATCTAATGAG AAATCCTTTT GTCCATTCCA CGGATCAACA AGCTGGAGAG CAGATAGGCG ATGATCCAAC AAAATACGGA GAAAACTCTT GTCTCGCACA TGTTAGTGAG TCTTATCAAT CATCAGGGAC GGTTCTAAAT GTACCCACTC ATGGGAATAC TTTGGCTGCT CCCGATCTTG AATCACCAAG CGCGAAATCT GTGAATAAGG GCACACCCTC CTCTGTTCAT GCAAAGCGCG CAACATTCTG GGGTCGAGGC AGTGCCAGAA AGATATCCAC AGATGGGTCG TTTGATTCTT CAGGAGAAGA CGAGCTTGCT ATACAGAGGC TCGAGACCAC AAAAAATGAA CTGCGACAAC GAATTGCAAA GGAGGCCAGA GGTAATGCAA TATTACAGGC TAGCTTGGAG AGAAGGAAGC AAGCACTGCA TGAACGTCGT TTGTCGCTTG AACAAGATGT GTCAAGATTA CAAGAGCAGC TGCAAGCTGA AAGAGATCTC CGAGCAGCAC TGGAGGTTGG TTTGAGCATG TCCTCTGGAC AATTCAGTTC ACATGGTGTG GATTCAAAAA CAAGGGCTGA GCTTGAGGAA ATTGCTCTAG CTGAGGCTGA TGTGGCCAGG CTGAAGCAGA AAGTTGCAGA ACTTCACCAT CAGCTTAACC AGCAACGTCA GACTCACTTT GGTTCCTTCT CAGATGCACG TGATACTCAT CAGTATCTCC AGAATCACAA TCCTCAAAAA AGGTTTCTTC AGCAAGATTT TGATTCCACT CTTGCCTATG TAAATCATGA AAGGAAACAA AGACACGAGG AGAATTTACT GGGAGCGGAG TGGAGAAATA GTAAAGGGGC AGGATCTTTT GGTGTTGGCA ATAGCAGGCA ACCATCTCGT AAGCAAATAC CAGAATCAAC AAACATAACT GACTCTAAAA TCAGTGAAGA GTCTGGAAAG GTGTCTGTGG ACAAGTTCTC AGCCATAGAT TCTCCATCTG TTCCGTCGAC TTCAAGAGCA TTAGATATAA CAGAGTACCC AAGGCTTAAT CATCCGTCAG CTGCTGCATC AGCAGCTCTG GTAGAGTTAA CAACACGTCT TGATTTCTTC AAGGAAAGAC GTTCGCAGCT CATGGAGCAG CTCCAGAACC TCGACCTTAA CTACGGCGGC TCGTCTTCCC AAGATTTCAT ACACCGGCCA TCTTCTCCAC CTTGGAACTA AAAACATTAG AAAAATTGAA GAAAAGGCTA TGTTTGTTCT GTATATCCAT CCTTTTGGTG ATTGATTAAT GATGTTAGCA TTTGCTCTAC TCATTTTCTC CCCCAAAAGA CAATAATGAC CTTATTCTTT TGGGCAACAG TCTTGTGTGT ATATAAAGAG GTATTTTGTA ATGCAATTTT TTTTTTTTAT GCCAGGTTTG TTCATATGTG TTAACTCTGA AGCTGTCTTG ATATGTTAGT TTTTTTATGC TCTTGAGTTT CTGACCAAAC CAATTACAAC TG |
| Length | 3132 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 7815199.. 7822601 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G19390.1 |
| Description | Rho GTPase activation protein (RhoGAP) with PH domain |
| TAIR curator summary | Encodes a protein with similarity to REN1, a Rho GTPase activating protein. |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.74679 |
Ahg905917 | Subtilase family protein |
| 12.6886 |
Ahg484960 | phototropin 1 |
| 16.8819 |
Ahg496474 | Xanthine/uracil permease family protein |
| 28.2135 |
Ahg950184 | homolog of bacterial cytokinesis Z-ring protein FTSZ 1-1 |
| 30.2159 |
Ahg485553 | Zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein |
| 32.7109 |
Ahg482332 | Ribosomal protein S5 family protein |
| 34.4674 |
Ahg348313 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 41.833 |
Ahg471459 | 20S proteasome beta subunit E1 |
| 43.1625 |
Ahg477973 | ATP-citrate lyase B-1 |
| 43.3128 |
Ahg481399 | TPX2 (targeting protein for Xklp2) protein family |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|