Detail



ID : Ahg488830

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488830|fgenesh2_kg.6__1964__AT5G19410.1
Sequence
ATGGCTACAA GCCGCCGCGA AGAAGACTCC ATCATTCTTT TCTCATCCTC AAACTCTCCT GATGAATTCT CCTCTGCTTC CTCTTCATTT TCTTCTTCGC CACTCCCAAG CCCTAACCGC TACTCTTTAA CCGTCACTAA CCTCTCCTAC ACCATCCATC ACACCCCAAT ACTCAAATCT GTTTCATTAG CTGCTGAATC CTCTAAAATC CTAGCCGTGG TTGGCCCTAG CGGAACAGGC AAATCCACTC TTTTGAAAAT CATTTCAGGA AGCGTGAACC ACAAGGCACT GGATCCGTCT TCCGGGATTT TGATAAACAA TCGTAGAATT ACCGACTACA ATCAGCTACG CAGGCTATGC GGGTTTGTCC CGCAGGACGA TGACCTACTG CCTCTACTTA CCGTGAAAGA GACGTTAATG TATAGCGCCA AATTCAGTTT GAGAGATTCA ACGGCTAAGG AAAGAGAAGA TAGAGTGGAG AGCTTATTGA GTGATCTCGG TCTTGTTCTA GTCCAAGACA GCTTCGTTGG AGAAGGAGAC GATGAAGATC GTGGTGTTTC GGGAGGAGAG AGGAAGAGAG TTTCAATAGC TGTTGAGATG ATCCGTGATC CACCAATTCT GCTTCTTGAC GAACCAACCT CTGGTTTGGA TAGTCGAAAC TCGCTCCAGG TCGTTGAGCT TTTGGCTACT ATGGCAAAAT CCAAACAGAG AACCGTCCTT TTCTCCATCC ATCAACCAAG CTATCGAATC CTCGATTACA TCTCCGATTA CCTGATTCTT TCACGCGGAT CGGTTATCTA CTTGGGAAGT CTTGAACATC TCGAGGACTC AATAGCGAAA CTAGGGTTTC AGATTCCAGA ACAGCTGAAT CCGATAGAAT TCGCCATGGA AATAGTTGAG TCGTTGAGAA CTTTTAAGCC AGACTCGGTA GCTGTCGTAG AATCATCATC GATGTGGCCT GAAAACAACG AAAATGATGG GATTATCACA AAGAAAGAAG AGTTTCGTGT CCTAGACGTC ACCGAGATCT CATATCTCTG TTCGAGGTTC TGCAAGATCA TCTACAGAAC AAAGCAGTTA TTCCTGGCGC GAACAATGCA AGCGGTGGTA GCCGGATTAG GTCTAGGCAG CGTCTACACA AGACTCAAGC GTGACGAAGA AGGCGTAGCA GAGCGGCTAG GGCTCTTTGC CTTCAGCTTA AGCTTCCTCC TCTCTTCCAC AGTGGAAGCA CTTCCCATAT ACCTCCGAGA ACGTCGCGTT CTGATGAAAG AATCATCTCG TGGATCCTAC CGAATCTCAT CCTACATGAT CGCCAACACC ATCGCATTTG TACCGTTCCT CTTCGTTGTA TCTCTCCTCT TCTCCATCCC AGTCTACTGG ATCGTAGGCC TAAATCCATC GATTCAAGCC TTCTCCTTCT TTGTCCTCTG CGTCTGGCTC ATCATTCTCA TGGCCAGTTC TCTAGTGCTC TTCCTCAGCG CGGTTTCTCC TGACTTCATC TCCGGTAACT CCCTCATCTG CACCGTTCTT GGAGCCTTCT TCCTCTTCTC CGGCTACTTT ATCCCCAAAG AGAAGATCCC AAAACCATGG ATGTTCATGT ACTACGTGTC GCTGTACCGT TACCCGCTGG AGTCTATGGT GGTGAATGAG TACTGGAGCA TGCGAGAGGA ATGCTTCTCC AGCGGGAACA TGGGCTGCTT GATGACCGGA GAGGATGTGT TGAAGGAGAG AGGGCTTGAC AAGGATACGA GATGGATCAA TGTCGGGATC ATGCTTGCCT TCTTCGTTTT CTATCGAATC CTCTGCTGGG GGATTCTACT CAGAAAGGCT TCCAAGTCAA CCCATT 
Length1846
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7829735.. 7831580
Download Sequence
A.thaliana
AGI-codeAT5G19410.1
DescriptionABC-2 type transporter family protein
TAIR curator summary
Alias[ABCG23][ATP-binding cassette G23]
Gene coexpression
MR
MR Locus Description
8.24621 Ahg481932 laccase 3
18.3303 Ahg487334 laccase 12
24.8998 Ahg934840 laccase 5
32.7719 Ahg935239
43.2666 Ahg322456 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
65.7115 Ahg915751 Uncharacterised protein family (UPF0497)
73.1369 Ahg906590 Cysteine/Histidine-rich C1 domain family protein
77.4855 Ahg927566 cytochrome P450, family 94, subfamily B, polypeptide 2
84.4097 Ahg487408 C2H2 and C2HC zinc fingers superfamily protein
85.0353 Ahg951925
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression