Detail



ID : Ahg488866

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488866|fgenesh2_kg.6__2000__AT5G19730.1
Sequence
AGCCATATAT TGTTTTGGTC CTACTTTGTA ACTTTGGCAA ACACAACAAA AAACAAAAAC AGAAAAAAAA AACTCCTTAT TCTTTTGTAT TTGATTCTAA TTGTCGTATA GATGCCCAAA TTCAATTCAA CCCAAGCTCC CAATTTATTT CTTCTCCTTC TCCTCCTTCT CGTTATCCTT CTGTGTTCAA CGCAAACAAA ATGCCACACC AAAGGTCTAC GATTACGACC AAGAAACCAG AAGAATGTGA ACACGACGAG CGATCGGACA CAAAACCCGG AAGATGAGTT CATGAAATGG GTAAGATTCG TTGGAAGCCT TAAACACTCA GTGTTCAAGG CAGCCAAGAA CAAACTCTTC CCTTCTTATA CACTAACTGT CCACAAGAAA TCCAATAAAG GTGACTTCAC TAAAATCCAA GACGCCATTG ATTCTCTCCC TCTCATCAAC TTTGTTCGTG TCGTCATCAA AGTCCATGCC GGAGTTTACA AGGAGAAGGT GAACATACCC CCAATGAAGG CATTCATAAC AATAGAAGGA GAAGGAGCAG AGAAGACAAC AGTGGAATGG GGAGACACAG CACAAACCCC TGACTCAAAA GGCAACCCCA TGGGCACTTA CAACTCGGCC TCCTTCGCCG TCAACTCTCC TTTCTTTGTC GCTAAGAACA TCACTTTCAA GAATACGACC CCAGTCCCCT TACCGGGCGC AGTTGGAAAA CAGGCGGTGG CATTGAGAGT TTCGGCAGAC AATGCCGCAT TTTTCGGGTG TAGAATGCTT GGTGCTCAAG ACACTCTCTA TGACCATTTG GGAAGACATT ATTACAAAGA TTGTTACATT GAGGGATCAG TTGACTTCAT CTTTGGCAAT GCCCTTTCTC TGTATGAGGG GTGTCACGTG CACGCGATAG CGGATAAGCT AGGAGCAGTG ACGGCACAGG GAAGGAGCAG TGTGCTAGAG GACACCGGAT TCTCTTTCGT AAAATGTAAG GTGACAGGGA CAGGGGTTTT ATATCTTGGG AGGGCATGGG GTCCCTTCTC AAGAGTCGTC TTTGCTTACA CTTATATGGA CAACATCATC CTCCCTAGAG GCTGGTACAA TTGGGGCGAC CCTTCACGCG AGATGACGGT GTTCTATGGG CAGTACAAGT GCACGGGAGC AGGAGCAAAC TATGGAGGGA GGGTGGCTTG GGCAAGAGAG CTCACCGACG AAGAAGCTAA GCCTTTTCTT TCTCTTACCT TTATCGACGG CTCTGAATGG ATCAAACTCT AACCATTACA CCTTTTTTTG TCGTTTTAAT TTTCCACCTA ATTAATAATG TTCATTTTCC CCTTAATAAA ATAAAAACAA TTTTTT 
Length1356
Protein Sequence
Protein Residue
Map Locationscaffold_6: 7958356.. 7961179
Download Sequence
A.thaliana
AGI-codeAT5G19730.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9 Ahg487523 Eukaryotic aspartyl protease family protein
12 Ahg482667 xyloglucan endotransglucosylase/hydrolase 32
17.5499 Ahg486566 FASCICLIN-like arabinogalactan-protein 10
25.2389 Ahg491000 beta-galactosidase 3
27.5681 Ahg927503 Leucine-rich repeat (LRR) family protein
27.7489 Ahg474990 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
27.9285 Ahg492529 Disease resistance protein (TIR-NBS class)
34.4674 Ahg480193 O-Glycosyl hydrolases family 17 protein
37.229 Ahg485893 plasma membrane intrinsic protein 2;5
37.4166 Ahg494383 GDSL-like Lipase/Acylhydrolase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression