Detail



ID : Ahg488975

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|488975|fgenesh2_kg.6__2109__AT5G20690.1
Sequence
ATGGCTGCTG CTCCCGGTTT CTTCCTCCTC ATCCTCCTCT TCTGTTTTTC AATCTCCCCT TCTTTGCAGC ACGTGAGCGA GTCCGAACCG CTTGTGCGCT TCAAGAGCTC GGTGAATATA ACCAAAGGGG ACCTAAATTC ATGGAGATTA GGAACAGATC CTTGCAGTGG GAAATGGTTC GGGATCTATT GCCAAAAGGG TCTAACAGTC TCAGGCATTC ACGTCACACG GCTTGGTCTC TCAGGAACCA TCACCGTCGA TGATTTAAAG GATCTCCCAA ATCTTAAGAC GATCAGGCTT GACAACAATC TCCTCTCTGG TCCTCTCCCG CATTTCTTCA AACTCCGAGG CCTAAAGTCT CTCATGCTCT CTAACAACAG CTTCTCCGGC GAGATCCGTG ACGATTTTTT CAAGGACATG TCAAAGCTCA AGCGACTATT TCTTGATCAT AACAAATTCC AGGGAAATAT CCCTTCCTCC ATTACACAGC TCCCTCAACT CGAGGAGCTT CACCTTCAAA GTAATAACTT CACCGGAGAG ATACCTCCAG AGATCGGCAA CATTAAGAAC CTTAAAGTCC TCGACCTCTC AACCAACCAA CTCGAAGGAA CCGTCCCGGA AAGCATCGCC GATAGGAAAA ATCTCGTTGC GAATTTGACA GAAAACGAAT ACTTGTGCGG GGCGTTGATA GACGTTGAAT GTGAGGATAT TAACCTAAGC GAAGGGGAAG GACATAACCG GAAAGCACCA ACCTCGGTAC CACAAACCTC GAACACGGCC ACGGTACACG CAATCTTGGT GTCGATCTCG CTTCTTCTCA TGTTCTTTAT TATTGTGGGA ATTATAAGGA AGCGAAATAA GAAGAAGAAC CCTGACTTTC GAATGCTCGA CAACCAACGC AACAACGATG CTGTGGAAGT CAGGATATCC GAATCTTCAT CCACGACCGC GAAAAGATCT ACAGATTCAA GCAGGAAGCG CGGTGGGCAT GCGGATGGCG GTTCCTCCAA GAAAGGCTTG TCGAATATTG GTAAAGGTGG TAACGGAGGA GGAGCTCTAG GCGGCGGGAT GGGTGACATT ATAATGGTGA ATACGGAAAA GGGTTCCTTT GGTTTACCCG ATCTGATGAA GGCTGCAGCC GAGGTGCTTG GCAACGGTAG CCTTGGATCA GCTTACAAGG CGGTGATGAC CACTGGATTA TCCGTTGTGG TGAAGAGGAT TAGGGATATG AATCAACTTG CACGCGAACC TTTCGATGTC GAGATGAGAC GATTCGGGAA ACTCCACCAC CCTAACATTC TTACCCCTTT AGCCTATCAC TACCGCCGCG AAGAGAAGCT TGTAGTCTCC GAATACATGC CTAAAAGCAG CTTGCTTTAC GTTTTACATG GTGATCGTGG GATATATCAT TCCGAGCTAA CTTGGGCAAC AAGATTGAAG ATCATCCAAG GAGTGGCTCA CGGAATGAAG TTCTTGCACG GGGAGTTTGC GTCCTACGAT CTCCCACACG GTAACCTCAA ATCCAGCAAC GTTCTCCTCA GCGAGACCTA TGAGCCTTTG ATCAGCGATT ACGCGTTCTT ACCGCTTCTC CAACCAAGCA ACGCATCGCA AGCATTGTTT GCTTTCAAGA CGCCCGAGTT CGCGCAGACA CAACAGGTCT CTCATAAATC AGACGTCTAC TGCCTCGGAA TTATAATTCT AGAGATCTTG ACGGGGAAAT TCCCTTCTCA ATACTTAAAC AACGGTAAAG GCGGGACTGA TATAGTTCAA TGGGTACAAT CTTCGGTTTC GGAGCAAAAA GAAGAAGAAC TTATCGATCC GGAGATAGTA AACAATACTG AATCAATGCG ACAGATGGTG GAATTGTTGC GGGTTGGGGC TGCTTGTATC GCAAGTAATC CAGATGAGAG ATTAGACATG AGGGAAACTG TTAGAAGGAT AGAACAAGTA AAAGTTTGA 
Length1959
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8342740.. 8344850
Download Sequence
A.thaliana
AGI-codeAT5G20690.1
DescriptionLeucine-rich repeat protein kinase family protein
TAIR curator summary
Alias[PRK6][pollen receptor like kinase 6]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg921560 FBD, F-box and Leucine Rich Repeat domains containing protein
7.48331 Ahg925744
11.6189 Ahg944913 Putative membrane lipoprotein
13.4164 Ahg892274 SGNH hydrolase-type esterase superfamily protein
13.7477 Ahg919859 P-glycoprotein 10
13.784 Ahg944327 zinc finger (C2H2 type) family protein
14.8661 Ahg470876 Cation/hydrogen exchanger family protein
15.4919 Ahg481664 transposable element gene
15.6525 Ahg917658 subtilase 4.13
17.5784 Ahg921700 ENTH/VHS/GAT family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression