Detail



ID : Ahg489001

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489001|fgenesh2_kg.6__2135__AT5G20930.1
Sequence
TAAAGAGAAC TTTGTGTTGA CCCCTCTCTT TCCCTCCTAA TTCCTTAGGG TTCCTCGAAT TTTCTTTTTC ACCGAAACAC AACCTTGTCT CTCTATCTTT CTCTGTACGT TTTATTCACT TTCCTCCACG TGGATTTTGC ATAAAAGCAT GAAAATTTGT TGATGGGTTT CTCTTCGACA TCCAGATTCT AGCTTCCAAT TCCGTAAAAA AAACCCTAAT TTTTCGAATT TACTCTGATC TGGGTAGAAG AATTAGGGAG TGAAGTGTCC GCAAGTGTTT GGCAATGTCG GATGACATGG TGATGCATTT CTCCTCGAAT TCTTCCAATC AGTCGGATCA CTCTTTGCCC GACAAAATCG CCAAGCTTGA GGCCCGCTTG ACTGGTAAGA CCCCTTCCTC GGCGAAGCCA CCACAACTGC AGCAGCAGCA GGTCTCTGTC TGGTCATCTG CTTCTTCTGC CGCTGTCAAA GTCGTGACTT CCACACCCCC GGGATTGTCG GAAACCTCTA TCAGTGATTC CGATGACGAG AATACTGGAG ATTTCCTAAT CCGAGCGAAT ACCAAAAAGC GACAGAAAGT TCAAGAGTCT AACAACTTCA GTGTTGTTGA TCATGTGGAG CCCCAAGAGG CAGCATATGA TGGAAGGAAA AATGATGCTG AGTCCAAGAC AGGCCTTGAT GTAAGTAAGA AGAAACAAGG TCGAGGTCGG GCTTCCTCAA CTGGTAGAGG GCGTGGTTCT AAAACTAATA ACGAAGTGAC AAAATCTCAG TTTTTGGGTG CACCAGTATC AGCTGCAAAT CAACAGGATG TCTCTGAGCA AAAGGATTTT AGGCCTGATG GACAACTTAG GAATGGTGAA TGCTCTCTCC ATGATGAAGA CTTGACATCT TTGCGTGCAA AAATCGCTGT GCTAGAGGAG GAATTGCGTA AATCTCGACA AGATTCTTCT GAGTATCACC ACCTTGTCAG GAAGCTTGAG AATGAGGTAA AAGATCTGAA AGATCAGGAA CAACAAGGGA AGCAAAAGAC AACTAAAGTA ATCTCTGACC TTCTCATATC TGTTTCCAAA ACTGAGAGAC AAGAAGCAAG AACGAAAGTC AGACATGAAT CTTTGCGATT AGGCAGTGTT GGTGTTCTCA GGACAGGAAC GATCATAGCT GAGACATGGG AGGATGGACA AATGTTGAAA GATCTGAATG CTCAACTTAG ACAATTGCTG GAAACCAAGG AGGCTATTGA GAGACAAAGA AAGTTCCTTA AGAAACGACA AAATGGTGGT GTAGATAAGA ATGACGGAAC TGACACAGAA TCAGGAGCAC AAGAGGAAGA TATCATCCCT GACGAGGTTT ACAAGTCTCG TCTTGCTAGT ATTAAGCGGG AAGAGGAAGT TGTTTTGCGT GAGAGAGAAA GGTACACATT GGAGAAGGGG CTGCTTATGA GGGAGATGAA ACGCATACGA GATGAAGATG GTTCTCGTTT CAACAATTTC CCAGTTTTGA ATAGCCGATA TGCTCTTCTA AATCTTCTTG GTAAAGGCGG ATTTAGTGAA GTCTATAAGG CATATGATTT GGTGGACCAT AGATATGTTG CGTGCAAGCT TCATGGTTTA AATGCTCAGT GGAGTGAAGA AAAGAAGCAA AGTTACATCC GCCATGCCAA CAGGGAATGT GAGATCCATA AAAGTCTTGT GCATCACCAC ATTGTTCGGC TTTGGGATAA ATTTCATATC GACATGCATA CATTCTGCAC CGTTCTGGAA TATTGTAGTG GAAAAGACCT TGATGCTGTT TTAAAGGCTA CACCTAATCT TCCTGAGAAA GAAGCGAGGA TTATCATTGT GCAAATAGTT CAAGGCCTTG TATATCTGAA CAAAAAGTCA CAGAAGATAA TCCACTATGA TCTGAAGCCT GGTAATGTTC TCTTTGATGA GTTTGGAGTA GCAAAAGTGA CTGATTTTGG TCTGAGCAAG ATAGTGGAGG ACAATGTTGG TTCTCAAGGA ATGGAGCTTA CATCACAGGG AGCTGGAACA TACTGGTACT TGCCCCCAGA ATGCTTTGAG CTTAACAAAA CTCCTATGAT CTCATCAAAG GTCGATGTAT GGTCAGTTGG TGTTCTATTT TACCAAATGC TATTTGGAAA GCGACCTTTT GGACATGACC AAAGCCAAGA ACGGATACTA CGAGAAGACA CAATCATTAA AGCCAAAAAG GTTGAGTTCC CAGTAACAAG ACCCGCTATC TCAAATGAAG CGAAGGATTT GATTCGACGG TGTCTAACAT ATAACCAGGC CGATAGGCCG GATGTTCTAA CAATGGCACA GGATCCATAT CTTTCATACT CTAAGAAATG AGAGTGTGTA GTCTTCACAA ACAAACCAGA GATACTAAAG GACCAGATCC TAGAATTCTT TTTGGTATAG ATTATAAAGT TATTGTTTTG TTTGTCTAAA TATTTTATCT CCTGTCTTCC TTTTATTATG TAACATGTTA TGTATATTCT TCATGTTTTA TAATAGAAGA GAGATGAAAG TTGG 
Length2534
Protein Sequence
Protein Residue
Map Locationscaffold_6: 8430989.. 8436388
Download Sequence
A.thaliana
AGI-codeAT5G20930.1
DescriptionProtein kinase superfamily protein
TAIR curator summaryNuclear serine/threonine protein kinase that requires a coiled-coil region for oligomerization and catalytic activity. Required for leaf and flower development. Expression localized to the developing style by stage 13.
Alias[TSL][TOUSLED]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg480532
11.9164 Ahg935024 Tetratricopeptide repeat (TPR)-like superfamily protein
17.7482 Ahg495572 RNA-binding protein 45A
37.1483 Ahg495266 Transducin/WD40 repeat-like superfamily protein
38.1051 Ahg494798 Galactose oxidase/kelch repeat superfamily protein
42.7317 Ahg475997 ATPase E1-E2 type family protein / haloacid dehalogenase-like hydrolase family protein
49.5984 Ahg472140 Pectin lyase-like superfamily protein
52.4786 Ahg925691 Arginyl-tRNA synthetase, class Ic
53.8331 Ahg497270 global transcription factor group E7
57.9655 Ahg487654 nuclear factor Y, subunit B12
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression