Detail



ID : Ahg489304

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489304|fgenesh2_kg.6__2438__AT5G24390.1
Sequence
ACTCTGATTT TGACTTCTCT TTCAGATTCT AGAGAGAGAG AGAGAAGGAA AAATCCCAAC TTTCTACAAA GAAGCGGAAG CTAGTTTCTT CAACGACGCG GCTAAGACGG AGAAGGAGGA GGAGGTCGTA TGGTTTTCGC CGGAGTTTTG GATCAAATCT GTTACCGATT TGTACGGACA TTTTCAGATT TTTGGACCTT TAAATTGGGG ATGGGTTTCG ATGAAAGCTC TTAGAAGAAT TCAAACGAGG TCTTCGTTTC CTAATCCTTC TTCTCCGTCA TCTCCGTGGA CTCATTTGCG TTCTGCTTTC GTAATTGTTA CTTCTTCTTC TCCTGCTTCT TGTTCTTCTT CTGATCCGCA TAGGCTAAAA TCGCCCTGGT CCCGAAGAAA ACGAAAGAAA CCCCTCACAC TTCGCCGGTG GAGAAGGTTT TTCACTCCCG AGGGTAGACT TCGGAACGGA GGAGTAGATT TATTGAAGAA AGTCCGGAGT AGAGGCATTG ATCCTAGCAT TCGTTCGGAG GTTTGGCCAT TTCTTCTTGG AGTGTGTGAT TTGAATAGTT CCGAAGAAGA GAGAGGTGCT ACAAGAACTT GGAGAAGAAA AGTGTATGAG AGACTACGCA GGCAGTGCAA AAGGCTTCAA AGACAAAACA GTGCAACTCT TAAGTTAAAC AAGATCAATA AAACTACTCA AGATGAGCAT GATAGTTGGT CTCTTGCACA AGACTCTGAC AGTTCATGTT CTGGTGATGC TTGCAGCGCC CACGAGTCTC TTACTAGCGA CAAAGACAAC ACGGAAGATA TTGGCTACAT GAGTGATGTC TCATGTACGC TTGACAGAGA CTACTCTGGT TCCAGACACC TGAATTCTGA GTCCTCAGAT TCAGATTCAT CTGATGAGAA TGATTCTGTT CAGGTCGCTC CTTCTTCTGA AGGGAGGGAT GAAAATAGTA CTTCTCCATC CAGCATATAT ATTTCTCGTA CCAAAGAGGA TTTTGTGACC TGGCAGCGTA TTATCCGTCT TGACGCTCTT CGTGCCGATA CAGAGTGGAC TCCATATTCC TCATCCCAAG CTATGGTGTC AGAGAATAGG GCACGCCGTG CTGCTGAGGC AGTTGTTTTA AAGGATTACA GTCATTTGGA ACCTTCGAAA GTCTTTCACG CTGCACGGCT TGTTGCTGTT CTTGAAGCCT ATGCCTTATA TGATCCTGAA ATTGGCTATT GCCAAGGAAT GAGTGATCTT CTCTCCCCTA TACTCTCTGT CATACCTGAT GACTACGAGG CATTTTGGTG TTTTGTTGGG TTCATGAAGA AAGCACGTCA GAATTTCAGA CTCGATGAGG TTGGGATCAC AAGGCAACTC AACATAGTAT CAAAGATTAT CAAATCCAAA GACTCACAGC TCTACAAGCA TCTTGAGAAA GTCAAGGCGG AAGACTGTTT CTTTGTTTAC AGAATGGTGC TTGTGATGTT TAGAAGAGAG CTGACTCTGG AGCAAACACT GTATCTCTGG GAAGTGATTT GGGCAGACCA AGCTGCAGTA AGAGCTGGCA TGGGGAAATC TTCCTGGAGC CGTCGAATAA AGCAGCGGGC TCCTCCCACA GAGGATTTGT TGCTGTACGC GGTAGCTGCT TCTGTGTTGC AAAGGAGGAA AGTCATAATA GAGAAGTACA ATAGCATGGA GGAGATTCTC CGGGAGTGCC ACAATATGGT AGGGAAACTA GACGTGTGGA AGCTCTTAGA CGATGCACAC GACCTTATTG TCACCCTCCA CGCCAAGATC GAACATTCGA ATCCCATAAT CGTTTAATTT ATCAAGATTT GCCATCTGGT ATCAGAACTG CCTGCAGGTT CTTGTATTTG CGCAACAAAC CCAGGATTTG ATATACTGCT ATCTAAATCC CGATGTAACA TATAACAAGG CCAGTATCAA GATAGGCATG ATTTGTGTGG TGTGTTGTGA AACTTTCAGA GGTGAGTTTC TTTGCCTCCA TTTTCAATTT TGTATATGAA ACAATTTTTT TGTGCCGGGA AAGAGAATCT TCCGTCGGTA AAAGAATAAA CCAACTCTTT CTGTTCATTC TTATTCCAAA ATTATTAATA T 
Length2101
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10067357.. 10070352
Download Sequence
A.thaliana
AGI-codeAT5G24390.1
DescriptionYpt/Rab-GAP domain of gyp1p superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.94987 Ahg906966
11.0454 Ahg921126
31.3847 Ahg488633 disease resistance protein (TIR-NBS-LRR class), putative
47.5605 Ahg495665 Pentatricopeptide repeat (PPR) superfamily protein
49.96 Ahg950924 peptidemethionine sulfoxide reductase 1
60.663 Ahg493888 WD-40 repeat family protein / zfwd3 protein (ZFWD3)
71.4143 Ahg477523 Protein kinase superfamily protein
74.2698 Ahg897214
75.2662 Ahg344921 tRNAHis guanylyltransferase
95.3572 Ahg894625
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression