Detail



ID : Ahg489353

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489353|fgenesh2_kg.6__2487__AT5G24930.1
Sequence
AATGCCAAGT AATTTCATCT CAATACAATA AAATTACGTT GTTTGGCTAA GATTTCACCA CGTGTCAACA TTTCATTCGA TCTAGATGGA TACCCATGGA CCCCACATGG ATAGACTCAT TGACACGCTC ATGTGAAGCC ATAGTAACAC CAACCACAAA AGAAAGAGAA AGAGAGAGAG ACCCTGAAAC CTAGAGAGAG AAAAATGGCG TCTAAGCTCT GCGATTCGTG CAAATCGGCG ACGGCGGCGT TATACTGCCG ACCAGACGCA GCGTTTCTAT GCTTAAGCTG CGATTCAAAA GTCCACGCGG CGAACAAACT CGCGTCACGA CACGCGCGCG TGTGGATGTG TGAAGTGTGC GAGCAAGCAC CGGCACACGT CACGTGCAAA GCAGACGCGG CCGCGTTATG CGTCACGTGC GACCGTGATA TTCACTCGGC TAATCCGTTA GCTCGCCGTC ACGAACGCGT TCCCGTTACT CCGTTTTACG ATTCCGTCTC TAGTGACGGT TCCGTTAAAC ATACCGCCGT TAATTTCCTT GACGACTGTT ACTTCTCCGA TATAGACGGT AACGGAAGCC GTGTAGAAGA GGAGGAAGAA GCTGCTTCGT GGCTGCTTCC GAATCCGAAG ACTACGACGG CTGCGACGGC GGGGATGGTT GCTGTTACTG CAGCTGAGGA AGTTCCGGGA GATAGTCCGG AGATGAACAC GGGTCAACAG TATTTGTTCT CGGATCCGGA TCCGTATCTG GATCTGGATT ACGGGAGTGT TGATCCAAAA GTGGAATCGT TGGAGCAGAA TAGCTCCGGT ACCGATGGTG TTGTTCCGGT GGAGAATCGG ACGGTTAGGG TTCCGACGGT GAACGAGAAT TGCTATGAAA TGGATTTTAC CGGAGGATCT AAAGGCTTTG CTTATGGTGG TTACAATTGC ATCAGTCACA GCGTCTCATC ATCGTCGATG GAAGTGGGAG TGGTGCCAGA TGGTGGCTCT GTGGCCGATG TTTCGTATCC TTACGGTGGT CCGGCAACCA GTGGAGCAGA TCCCGGAAGC CAGCGGGCTG TTCCGCTGAC TTCAGCTGAG AGAGAGGCGA GGGTAATGAG GTACAGAGAG AAGAGGAAGA ACAGGAAGTT TGAGAAGACG ATAAGGTATG CTTCAAGGAA AGCTTATGCG GAAATGAGAC CGAGAATCAA GGGACGGTTT GCGAAGCGGA CGGATACAAG TGAGAGCAGT GATGTGGTTG GTCATGGTGG TATCTTTAGT GGGTTCGGAC TTGTACCTAC GTTTTAGATA TTGAGAGAGA AAGATAGAGA CTCTAAAAAT GGAAGTTGGT TTGGTGTTTG TTTTAGTAAT AATGTTTTAA CGAACGTTTT TTTTGTTGAT GAGTTTTTTA ATTAGTTGTG GGAGAGAGGA AGAGAAGTGA GTGGTGGTGT TTATAAGTAA CCTGT 
Length1445
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10422643.. 10424625
Download Sequence
A.thaliana
AGI-codeAT5G24930.1
DescriptionCONSTANS-like 4
TAIR curator summary
Alias[ATCOL4][BBX5][COL4][B-box domain protein 5][CONSTANS-like 4]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg477956 Glycosyl hydrolase superfamily protein
7.74597 Ahg496704 general control non-repressible 5
8.48528 Ahg483737 plasma membrane intrinsic protein 1B
14.6969 Ahg473259 Early-responsive to dehydration stress protein (ERD4)
17.1756 Ahg476582 Pyridine nucleotide-disulphide oxidoreductase family protein
17.2337 Ahg479762 FRIGIDA-like protein
18.4932 Ahg476523 B-box type zinc finger protein with CCT domain
21.7025 Ahg481283 aldehyde dehydrogenase 11A3
23.3238 Ahg477472 CONSTANS-like 2
26.8328 Ahg472589 glutamate:glyoxylate aminotransferase
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression