Detail



ID : Ahg489425

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489425|fgenesh2_kg.6__2559__AT5G25752.1
Sequence
TATTATACCG GATTAGACCA AAACTGAATC TCTCTCAACT CTCAAATCTC AATGTCTCAG CTTCTTCACG TTCACCGTCT CTCTCTCCCA CAATCGTCTC TTCGTTTCAG ATTCCCGCCT TTACATCGGC GCCGTGCAGC TTCGTCGCCG TCTAACTCAA CTGAATCCAC CGTGTTTCGT TCTCTCACAG TCTCCAGATC TCAAATAACT TGCAGATTCA GCCAATCAGA TATTACGCCA CAATTTGAAT TGGATAAAGC ACAAGACAAT CGAAAACCAC AAAAGCGAGC GAATGGCATA TTTTGGATCA TACTTATCAA TCTTGGCATA TATGTTGCTG ATCACTTCTT TCAGGTTCGC GGGATCAAAT CTTTGTATTT GTATCACAAT TTTCCGGCAT GGTACCAGTT TGTGACTGCT ACATTCTGTC ATGCTAACTG GAACCATCTC TCCAGCAATC TTTTTTTCTT GTACATCTTT GGAAAGCTTG TTGAAGAAGA AGAAGGAAAC TTTGGTTTGT GGCTCTCTTA CTTGTTCACT GGTGTTGGAG CTAACCTGGT TTCTTGGTTA GTTTTACCGA GAAATGCTGT TTCTGTTGGA GCCTCGGGAG CTGTTTTTGG GTTATTTGCA ATCAGTGTCC TCGTCAAGAT GTCTTGGGAT TGGAGGAAAA TCCTTGAAGT TCTTATATTG GGTCAGTTCG TTGTTGAGAG GGTAATGGAA GCAGCTCAGG CATCGGCTGG ATTATCAGGA ACTATATATG GTGGCTACTC TTTACAAACT GTTAATCACA TTGCTCATCT CTCTGGTGCT CTTGTTGGTG TTGTTTTAGT TTGGCTTCTC AGCAAATTCC CTTCGGAATC TGTGGATCAA GAAGTTAAAA AGTCCCCGCA AAAGTGAGGA GACAATCGGG ATAACCTTTT CTTGTAAGGA ACATACTAGC TGTCCAGTGA ATGCAAGGCA GATGAAACAA TTGATAGATT GACAAAATAT CCTTGTAAAA ATCTGAAGAA CGGGCTCTAA TCCGAG 
Length1026
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10897765.. 10899522
Download Sequence
A.thaliana
AGI-codeAT5G25752.1
Descriptionrhomboid-like protein 11
TAIR curator summaryChloroplast-localized rhomboid-like protein.
Alias[ATRBL11][AtRBL9][RBL11][RBL9][ARABIDOPSIS RHOMBOID-LIKE PROTEIN 11][rhomboid-like protein 11][RHOMBOID-like protein 9]
Gene coexpression
MR
MR Locus Description
2.44949 Ahg473376 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
3.87298 Ahg490781 Pentatricopeptide repeat (PPR) superfamily protein
10.1489 Ahg483189
10.247 Ahg932846 Protein of unknown function (DUF295)
21.0713 Ahg932754 Leucine-rich receptor-like protein kinase family protein
21.4942 Ahg487372 arginine-tRNA protein transferase 1
31.749 Ahg489806 Cofactor-independent phosphoglycerate mutase
49.0408 Ahg481113 Alkaline-phosphatase-like family protein
56.4978 Ahg920262 Protein of unknown function, DUF647
75.7496 Ahg483435 Far-red impaired responsive (FAR1) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression