Detail



ID : Ahg489426

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489426|fgenesh2_kg.6__2560__AT5G25754.1
Sequence
ACCGGATGAT AGAACCGGTG GTAATAAAGA AACCCTAGGC TTTTTTTAGT GTCTCTGGAC TCTGGTCTTC TTCTTCCACT AAGAATTGAT CGGCGAGCGC TACAATGGCG AGCAATTACG AGTACGAGGA AGGTCCGGCG GCGAGCTACG AGAGGGAGAG CGGCGGGGAG AGCGGGTACG ACCCAAATAT AGTGGCGGAT TCGGTGAAAT CGTTCGTGGT ACACATGTAC AGACACATAA GGGAGAAGAA CGTGTACGAG ATCCACCAGA TGTGTGAGAC ATCGTTCCAG AGCATATCGG AACGTCTGTT CAAGGAGACG CCATGGCCAA GTGTGGAAGC TATAGCTCCA TACGTAGACA ACGACCATGT GTTCTGTCTT CTGTACCGTG AGATGTGGTT TCGACATTTG TATGCGAGGT TATCTCCTAC GTTGAAGCAG AGGATTGATT CTTATGACAA CTATTGCAGC CTCTTTCAGG TGGTGTTGCA CGGCGTAGTG AATATGCAGT TACCGAACCA GTGGTTGTGG GATATGGTGG ATGAGTTTGT CTACCAGTTC CAAAGTTTCT GTCAGTTCAG AGCAAAGCTC AAGAACAAAA CAGAGCAGGA GATTGCATTG CTCAGACAGC ATGATAAGGC ATGGAATGTC TATGGCGTGC TCAACTTCTT GCAAGCACTT GTGGAAAAGT CTTGTATCAT CCAAATTCTT GAGCATGACA AGCATGGCCT TGAACAGTTC ACTGCCACTG ATGGCTACGA TTACAGCGGT GGAAGTAACG TCTTGAAGGT CCTCGGTTAC TTCAGCATGG TCGGTCTCTT GCGTGTTCAC TGCCTCCTCG GTGACTACCA CACTGCTCTC AAATGGTTGC AGCCCATTGA CATCACTCAG CAAGGTGTTT ACACCAGTGT CATTGGATGC CATATTGCTA CCATCTATCA CTATGGATTT GCCAACCTTA TGTTGCGACG CTATCTAGAT TCTGTTCGTG AATTCAACAA GATTCTCCTC TACATTTTCA AGACTAAGCA GTACCATCAA AAGTCACCTC AGTACGAGCA ACTACTCAAG AAGAATGAGC AGATGTATGC ATTACTTGCT CTTTGCCTCT CCCTCTGCCC TCAACCTAAA CTCGTTGACG ACTCTGTCAG CTCTCAGTTG CGAGACAAGT ATGGTGAAAA GATGATGAGG ATGCTGAGGT ATGACGATGA GGCCTTTGGT ATTTACGATG AGCTCTTCTC TTATGCATGC CCCAAGTTTA TCACCCCTTC CCCACCATGT TTCGAGGAAC CTCTTGTCAA TTACAATCAG GATGCATACA GGCTTCAGTT GAAGATGTTC CTTTATGAGG TAAAGCAGCA GCAGCTCTTG TCGGGAGTGC GAACATTCCT GAAAGTCTAC TCCTCCATTT CTCTTGCTAA GCTCGCAAAC TGCATGGAAG TTGATGAGCC CACTCTAAGG ACCATATTGT TAACATACAA GCACAAGACC CATTCAGTTG ATTCCGATGG TAGGATCATC TCCAATGCAG ACATTGATTT CTACATCAAC AATGACATGA TCTACGTTGT GGAATCAAAA CCCGCAAAAC GTTATGGTGA TTTCCTCTTG CGACAGATTG CCAAGCTGGA CGGTGTGATA AACGACATGG ATCGTGTCAA ACTGGAATGA GGACTTTTCT GTGTTACACC TATCATCAAT GCCCAATCTG ATATGCTCTC TTTTAAACCC TAAATTTACT TGGAGCCAAA CACTTTTGAG AAGCTGTCTT CATGTGGTCA AATG 
Length1784
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10900822.. 10905755
Download Sequence
A.thaliana
AGI-codeAT5G25754.1
DescriptionRNA polymerase I-associated factor PAF67
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.07107 Ahg487711 ATP synthase alpha/beta family protein
10 Ahg484328 Amidase family protein
10.0995 Ahg486894 SCAR family protein 4
12.6095 Ahg494344 3-ketoacyl-acyl carrier protein synthase I
13.4164 Ahg484805 Spc97 / Spc98 family of spindle pole body (SBP) component
13.7477 Ahg930508 dehydratase family
15.4272 Ahg477907 NAD(P)-binding Rossmann-fold superfamily protein
18.3848 Ahg336171 toprim domain-containing protein
19.2094 Ahg934124 Trypsin family protein
21.9317 Ahg919388 pfkB-like carbohydrate kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression