Detail


ID : Ahg489433

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|489433|fgenesh2_kg.6__2567__AT5G27640.2
Sequence
GCTTCTTCTT TGTTTTTCCT ACTCCAATCC ATTTTGTATT GGATTTTTGA TATAATGTTT GAAATCATGT TGATGGCGGC GGTAGTTGAT ATTGATGCCC TATCGGCTCA ATTAGGGGTT AATTGGTCTG AGGTTAATCT CGATTCAATC CAACTTCCTT CTGGAAACAA CTTTGGGATC GAGAGTGATG ATGAAGCTGT ATACCATGAT GATCAGTCGG AATTCGACAC TGGATTTGGT AACATTATCG TGGTTGATCA CCTCCCTGTT GTTCCCAAGG AGAAGTTTGA GAAACTAGAA GGTGTTCTCA AGAAAATTTA CAATCAGTTA GGTGTTATTA AGGAAAATGG ACTGTGGATG CCCGTTGATC CCGATACGAA GATGACATTG GGCTACTGTT TTATTGAGTT CAATACTCCT CAGGAGACAG AACTAGATTG TTTGACAATG GTAGTGTATA TTCTAAGAGT TTGTTTCAAT GTCTGGGGCT CTTTGCAGGA AGCACAAAAT GCTAAGGAAA AGTCGCATGG CTACAAGTTG GACAAGACTC ACATCTTTGC TGTTAACATG TTTGATGATT TCGATAGGTT GATGAATGTG AGGGAGGAGT GGGAGCCTCC TCAGGCCAGG CCCTATGTCC CTGGGGAAAA TTTGCAGAAG TGGCTTACCG ATGAAAAAGC CCGGGACCAG CTAGTCATTC GTTCAGGCCC TGATACTGAG GTTTACTGGA ATGATGCTAG GCAGAAGAAG CCTGAACCTG TTCATAAGCG TCCTTATTGG ACAGAGAGTT ATGTGCAGTG GTCTCCTTTA GGTACATACC TTGTGACACT TCACAAGCAG GGGGCAGCTG TTTGGGGTGG TGCTGATACA TTCACGCGTC TCATGCGTTA TCAGCATTCT ATGGTCAAAC TAGTTGATTT CTCGCCAGGT GAGAGATATC TTGTAACTTA CCATAGCCAA GAACCAAGCA ATCCGAGAGA TGCAAGTAAA GTAGAGATTA AGGTCTTTGA TGTGAGAACC GGGAGGATGA TGAGAGATTT CAAGGGTAGT GCTGATGAGT TTTCAATTGG AGGACCTGGT GGTGTTGCTG GTGCCTCTTG GCCTGTTTTC AGATGGGCTG GTGGAAAAGA TGATAAATAC TTTGCCAAGC TTAGCAAAAA CACCATCTCT GTCTATGAGA CTGAGACTTT CAGCCTAATA GACAAGAAAT CCATGAAGGT TGATAATGTT GTGGATATTT GCTGGTCTCC CACTGATTCT ATCCTTTCAT TGTTTGTTCC TGAACAAGGT GGTGGAAACC AACCTGCCAA GGTTGCTCTA GTCCAAATCC CGAGTAAGGT GGAGCTGAGG CAGAAGAATC TCTTCAGTGT GAGCGACTGC AAGATGTACT GGCAGAGTAG TGGAGAGTAT CTTGCTGTTA AGGTTGATCG ATACACAAAA ACTAAGAAGA GCACATACTC TGGATTTGAG CTTTTCCGTA TCAAAGAAAG GGATATTCCC ATCGAGGTTC TTGAGCTGGA TAACAAGAAC GACAAGATCA TTGCTTTCGC TTGGGAGCCC AAGGGTCACA GGTTTGCTGT GATTCATGGT GACCAACCAA GACCAGATGT CAGTTTCTAC TCGATGAAGA CCGCACAAAA TACTGGAAGG GTTTCAAAGC TCGCAACGTT GAAGGCCAAA CAAGCCAATG CCCTCTTCTG GTCGCCCACA GGAAAGTACA TCATTCTTGC TGGGTTAAAA GGTTTCAATG GCCAGCTTGA ATTTTTCAAC GTGGATGAGC TCGAGACAAT GGCCACAGCT GAACACTTCA TGGCCACGGA TATCGAATGG GACCCAACTG GAAGGTACGT TGCAACCGCA GTGACATCAG TCCACGAGAT GGAGAATGGG TTCACCATAT GGTCTTTCAA CGGGAATTTG GTTTACCGGA TACTGAAGGA TCATTTCTTC CAGTTGGCTT GGCGTCCAAG ACCGCCATCA TTCTTAACTG CAGAGAAGGA AGAAGAGATA GCAAAGAACC TGAAGAAGTA CAGCAAGAAG TATGAGGCAG AGGATCAGGA CGTGTCGTTG CTGTTGAGTG AACAAGACAG AGAGAAGAGA AGGGCATTGA AGGAAGAATG GGAGAAATGG GTGATGCAGT GGAAGTCTCT GCATGAAGAG GAGAAACTCG CGAGGCAAAA TCTTCGAGAT GGTGAAGTTA GTGATGTGGA AGAAGATGAA TATGAAGCCA AGGAAGTTGA GTTTGAGGAT CTTATTGATG TCACTGAGGA AATCGTTCAA GAGTCGATGT AAGTTTCTCG GTCTCTTTTG TTACCATCTC TT
Length2322
Protein Sequence
Protein Residue
Map Locationscaffold_6: 10921215.. 10924557
Download Sequence
A.thaliana
AGI-codeAT5G27640.2
Descriptiontranslation initiation factor 3B1
TAIR curator summaryencodes a member of eukaryotic translation initiation factor 3B family.
Alias[ATEIF3B-1][ATTIF3B1][EIF3B][EIF3B-1][TIF3B1][ARABIDOPSIS THALIANA TRANSLATION INITIATION FACTOR 3B1][EUKARYOTIC TRANSLATION INITIATION FACTOR 3B][EUKARYOTIC TRANSLATION INITIATION FACTOR 3B1][translation initiation factor 3B1]
Gene coexpression
MR
MR Locus Description
12.6491 Ahg480841 Transducin/WD40 repeat-like superfamily protein
20.2485 Ahg494320 pentatricopeptide (PPR) repeat-containing protein
21.0713 Ahg483266 Ribosomal protein S5 family protein
23.5797 Ahg492352
24.6171 Ahg942027 Protein of unknown function (DUF3411)
24.96 Ahg941854 prefoldin 5
27.8209 Ahg316620 hydrolases, acting on acid anhydrides, in phosphorus-containing anhydrides;ATP-dependent helicases;nucleic acid binding;ATP binding;RNA binding;helicases
33.2415 Ahg493599 Peptidase M50 family protein
33.9411 Ahg474400 histone H2A protein 9
39.1152 Ahg927518 heat shock protein 91
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression