Detail



ID : Ahg490053

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490053|fgenesh2_kg.6__3187__AT4G12480.1
Sequence
AGAAAAAAAT GGCTTCAAAG AACTCAGCCT CTATTGCTCT TTTCTTCGCC CTCGACATCC TATTCTTCAC CTTAACTGCT GCAACTGATT GTGGTTGCAA CCAGAGTCCT AAGCACAAAC CGGTCCCTAG TCCTAAACCC AAGCCAGTCC CAAGTCCTAA ACCCAAGCCG GTCCCAAGTC CTTCGGTCCC AACTCCTTCA GTCCCAAGTC CTAATCCTAG GCCGGTCACA CCTCCAAGCA CCCCTAGTTC ATCTGGAAAC TGCCCTATAG ATGTTCTCAA GCTCGGTGTA TGTGCAAATG TCCTAAGCAG TCTACTTAAC ATCCAGTTGG GTCAGCCATC AGCTCAACCA TGTTGCTCGC TTATCCAAGG TTTGGTTGAC GTCGACGCTG CGATTTGTCT GTGCACTGCT CTTAGGGCTA ACGTTCTTGG CATCAACCTT AACGTTCCAA TATCTCTCAG CGTTCTTCTC AACGTTTGTA ACAGAAAGGT TCCGTCTGGT TTCCAATGTG CTTAAACGAT ATCAGCTATG CATACGATGC GATGCCCGTA CACAATATAC TCTTCAAAAT TACTACAGTT TGAATAAATT CATGTAATCT AATTTGTTAA AGATAAAAAA TAAATGTGTG AGATTTTTAT AGTTTTTTTT TTCTTGTATG CTTTTGTTGC AATCTATTT 
Length679
Protein Sequence
Protein Residue
Map Locationscaffold_6: 20821072.. 20821771
Download Sequence
A.thaliana
AGI-codeAT4G12480.1
DescriptionBifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
TAIR curator summarya putative lipid transfer protein, vernalization-responsive and cold-induced
Alias[EARLI1][pEARLI 1][EARLY ARABIDOPSIS ALUMINUM INDUCED 1]
Gene coexpression
MR
MR Locus Description
1.73205 Ahg483473 Chitinase family protein
2 Ahg926884 pathogenesis-related gene 5
3.4641 Ahg495838 Fibronectin type III domain-containing protein
4 Ahg471079 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
4.89898 Ahg330043 Chlorophyll A-B binding family protein
7 Ahg476615 catalytics
7 Ahg494080 HXXXD-type acyl-transferase family protein
7.07107 Ahg350602 high affinity nitrate transporter 2.7
7.2111 Ahg490080 plant UBX domain containing protein 4
9.38083 Ahg943161 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression