| Annotation |
|---|
| Description | jgi|Araly1|490401|fgenesh2_kg.6__3535__AT4G01750.1 |
| Sequence |
GAATCCGATC CAAGCTTGTG AAAGTTTCTC TGCAAATCTT GTTGCTCTGC TGCTACAACA ATGGCGCAGA AACAACAGAT TCTTCACCAA CAACGACCAT TCTCTTCCTC TCCTCGTTCT TATTCTTCAA TCTCAAACCG TCCCATCTTT CTCCTTAGCC GCAACGGTCT CCTCCTTCTC CTTCTCGCTC TCTTCCTTCT CCTTGGTGTA TTCTTACCCT GGCCAGGATC TCCTCTGTTG CTATTACCAA ACAAAGTCTC TTCTCCTTCT AATGCTACTT CTTTGTCTTC ACAAGCCAAA TCTGAATGGC GCGACTATAC CCTCGCTCAG GCCGCTAAGT TCGTGGCCAA GAACGGCACT GTGATCGTCT GCGCCGTGAG CTCACCATTC TTGCCTTTTC TTAACAACTG GTTGATTAGT GTTTCTAGAC AGAAGCATCA AGAAAAAGTC CTTGTGATCG CTGAGGATTA CATTACTCTG TATAAAGTCA ACGAGAAGTG GCCTGGCCAT GCCGTTCTTA TTCCTCCTGC GCTCGATTCT AGAACCGCAT ACAGTTTCGG TTCCCAGGGT TTCTTCAATT TCACAGCTCG AAGGCCGCAA CATCTCTTGC AAATTTTGGA GCTAGGTTAC AATGTTATGT ACAACGATGT TGATATGGTT TGGTTGCAAG ATCCGTTTCA GTATTTGGAG GGAAGCCACG ACGCGTACTT CACGGATGAT ATGCCTCAAA TTAAGCCTTT GAATCACTCT CATGATTTAC CAGATCCGGA TCAAAACGGA GAGACTTATA TATGTAGCTG CATGATTTAC TTGCGTCCCA CTGATGGTGC AAAGCTTCTA ATGAAGAAAT GGAGTGAGGA ACTTCAATCC CAAGCTTGGT CTGAGTCCAT CCGTTTTAAA GCAAATGACC AGCCTGCTTT TAACTTGGCA CTTAACAAAA CAGCTCATCA AGTGGATCTG TACTTGCTCT CGCAAGTAGC TTTTCCAACA GGAGGATTGT ACTTCAGTAA CGAGGCATGG GTTAAAGAGA CAAAGGGGAA ACATGTCATA ATCCACAATA ACTACATTAT CGGTTACGAC AACAAAATGA GACGTTTCCA AGAATATGGT CTATGGCTAG TCGATGATCA TACTCTCGAG TCTCCATTAG GGAAATTACA GTAAATTCCA ATTGATAAAG AAAGATAGTA CCACTGAGTA AACTCCTTAT GTTTTTGAGG GTCCTTAAAA GGTAATATTA TGTAAGTTTT ATTATATGGC TAATTCAGTA TGACTTGAGT TTGGTTAATC CAGTTGTGTA ATGTTAGTAA AAACAGAGGA AAACAGGGGA AAAATATCAG ATATTTTGCA AATTTTGGTC TGTATGTTGT AAACAAATGA GATTCGAGAT GTAT |
| Length | 1394 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 22623413.. 22625598 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G01750.1 |
| Description | rhamnogalacturonan xylosyltransferase 2 |
| TAIR curator summary | Encodes a protein with UDP-xylose-dependent xylosyltransferase activity, which transfers Xyl onto L-fucose and (albeit less efficiently) L-arabinose. The linkage to L-fucose was shown to be preferentially to the O-4 position. Analysis of mutant containing T-DNA insertion in this gene indicate that the RGXT2 protein might be involved in the synthesis of the α-D-Xyl-(1,3)-α-L-Fuc-(1,4)-L-Rha structure in pectic rhamnogalacturonan II. |
| Alias | [RGXT2][rhamnogalacturonan xylosyltransferase 2] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 24.8193 |
Ahg474162 | |
| 30.1496 |
Ahg496850 | zinc-finger protein 1 |
| 32.573 |
Ahg947663 | lysine histidine transporter 1 |
| 44.0227 |
Ahg493614 | PLANT CADMIUM RESISTANCE 2 |
| 50.3587 |
Ahg950628 | calmodulin-binding receptor-like cytoplasmic kinase 1 |
| 55.1725 |
Ahg492548 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5 |
| 59.127 |
Ahg475633 | phloem protein 2 A5 |
| 60 |
Ahg921441 | |
| 62.8013 |
Ahg492544 | cysteine-rich RLK (RECEPTOR-like protein kinase) 13 |
| 64.0312 |
Ahg471506 | Protein of unknown function (DUF1262) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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