Detail



ID : Ahg490559

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490559|fgenesh2_kg.6__3693__AT4G00100.1
Sequence
TCTTCAGCAG TCAGTGAGCA TCCATAGGAG AAAGTGTGAG AATCTGCCAC CATGGGTCGT ATGCACAGTA GAGGAAAGGG TATTTCAGCT TCTGCGTTGC CTTACAAGAG ACCGTCTCCG AGCTGGCTCA AGACCACCTC TCAGGATGTT GATGAATCAA TCTGCAAATT TGCCAAAAAG GGATTGACCC CTTCCCAGAT TGGTGTGATT CTCCGTGACT CTCACGGTAT CCCTCAGGTC AAGAGTGTTA CAGGAAGCAA GATCCTGAGG ATACTCAAAG CCCATGGCCT TGCTCCTGAG ATCCCTGAGG ATCTGTACCA TCTTATTAAG AAGGCTGTTG CCATCCGTAA ACATCTCGAG AGGAACAGGA AGGACAAGGA TTCCAAGTTC AGGCTCATCT TGGTTGAGAG CAGGATTCAT CGCCTCGCTC GCTATTACAA GAAGACCAAG AAGCTCCCTC CCGTCTGGAA GTACGAATCC ACTACCGCGA GCACCCTTGT GGCTTAAGCT GGAGTTGGTG GAGGAAGATT CTACTAGTCT GTTGCTTCCT TTTTGTTTTC ATGAAATCTG AATTTTAGTC TTCATGTGTC ACCAGGATTT GATGTGTTTG CCTCTCCCTT CTTTAAGAGA ATCGTATGAT CATGAATTTA 
Length650
Protein Sequence
Protein Residue
Map Locationscaffold_6: 23468579.. 23469715
Download Sequence
A.thaliana
AGI-codeAT4G00100.1
Descriptionribosomal protein S13A
TAIR curator summaryEncodes a cytoplasmic ribosomal protein S13 homologue involved in early leaf development
Alias[ATRPS13A][PFL2][RPS13][RPS13A][ribosomal protein S13A][POINTED FIRST LEAF 2]
Gene coexpression
MR
MR Locus Description
3.16228 Ahg493205 Ribosomal protein L23/L15e family protein
4.89898 Ahg477850 ribosomal protein L18
7.54983 Ahg483266 Ribosomal protein S5 family protein
10.583 Ahg488362 Ribosomal protein S4
11.225 Ahg487529 Ribosomal protein S4 (RPS4A) family protein
13.2665 Ahg490690 Ribosomal protein S25 family protein
13.6382 Ahg906639 Ribosomal protein L2 family
15.8745 Ahg473492 Ribosomal protein L6 family
17.0294 Ahg941581 Ribosomal protein S8e family protein
17.3205 Ahg486730 ubiquitin 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression