Detail



ID : Ahg490678

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490678|fgenesh2_kg.7__111__AT4G39100.1
Sequence
AATCGTACGC TCCTGAGATC CCACATGACT TGTTCTCACC ATAGTCCGCG AGACATTCAT TGAGAAGACT GATCGCAAAA ACCTTGAGCT TTCAGATGCC CAAGCAAAAA GCTCCAAGGA AGCAACTCAA GTCTTATAAG CTCAAACACA TCAACAAGAC GATTCAAGAT GGAGATGCTG TGTTGATGCG GTCGTCGGAG CCTGGGAAAC CGTCGTACGT AGCGAGGGTA GAGGCGATCG AGACGGACGC GCGTGGATCG CACGCGAAAG TTCGTGTGAG GTGGTATTAT CGCCCTGAGG AATCTATCGG AGGGAGGAGA CAGTTTCATG GAGCCAAGGA GGTTTTCCTC TCTGACCACT TCGATTTTCA AAGCGCCGAT ACCATCGAAG GAAAGTGCAA GGTCCACAGT TTCAGTAGCT ACACCAAACT CGACTCCGTT GGAAACGACG ACTTCTTCTG TCGTTTCGAG TACAATTCCG CCACCGGCGC GTTTGATCCT GACAGAGTCG CCGTGTTCTG CAAGTGTGAG ATGCCGTATA ACCCTGATGA CTTGATGGTA CAATGTGAGG AGTGTTCTGA GTGGTTTCAT CCTTCTTGTA TAGGAACAAC AATAGAGGAA GCTAAAAAGC TAGATAACTT CTACTGCGAA GAGTGTTCCC CACAAGAGCA GAATTTGCAT AACTCTAACT CAACTTCCAA AAACAGAGAT GCTAAGGTGA ATGGAAAGCG CAGCCTGGAG GTAACCAAGC CGAAGAAAAA ACACACTAAG CGACCAGGTT AACATAAAAA CCTGTAAAGG CTATATACAT AAATCTGGTT GGGTGAGTTG AGTATCAATC GTGTAATCAA CAAAGGTGGT TTGTTTTCTT TCTCTCACTA GTTTTTTCGT TTTTAAAGAA TGAGGGTTTA GGTTGTTGGC TTGATTATTG TATAATTTAT ATGTATAGCC TATGGTTTCT CGTCTCCTTT AGTTGTCACA TGAAATTTGG GTTAAATGGT TTACAAACAA AGAGAGGGTT AAGTTGCGTT TTATTTGTTT CTTCATTGTG AACTCTATTC GTTCTTTATT AATTCTAAA 
Length1079
Protein Sequence
Protein Residue
Map Locationscaffold_7: 376080.. 378420
Download Sequence
A.thaliana
AGI-codeAT4G39100.1
DescriptionPHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein
TAIR curator summaryPutative transcription factor containing a PHD finger and BAH motif, required for normal development
Alias[SHL1][short life]
Gene coexpression
MR
MR Locus Description
12.2474 Ahg482885 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein
22.7376 Ahg902101 Galactose oxidase/kelch repeat superfamily protein
24.8193 Ahg484153 SNARE associated Golgi protein family
25.2587 Ahg357730 Transport protein particle (TRAPP) component
30.692 Ahg938922 glucan synthase-like 11
31.4643 Ahg321088
35.2278 Ahg931273 UDP-glucosyl transferase 73B5
37.8153 Ahg483035 Mitochondrial substrate carrier family protein
41.5692 Ahg476734
45.9239 Ahg495170
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression