Detail



ID : Ahg490793

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|490793|fgenesh2_kg.7__226__AT4G40060.1
Sequence
AAAGAGAAAG TGTGAAACCA ACTTGCTCAT ATTGAAAACA AAGAACCATT GCTCTCTAGA TTAAAAGCTT CTCTCCCTCT TTTGGACTTT CTCAATCCAT ATCTCTCTCT TTGTTTTTCT AATTTAAAGT CTCCTCTTTC TGTTTATGAG ATTTCAAGCG AAGAAGCTCA ATTATGTTTA CAACATTGTT CTAATTTCAA AACTTCATAA GAATTTCTCT GATAATAAAG AAAAAGGTGT CATCATGAAG AGACTAAGCA GCTCAGATTC AATGTGTGGT CTAATCTCCA CTTCTACAGA TGAACAGAGT CCAAGAGGGT ACGGAAGTAA TTACCAATCT ATGCTTGAAG GTTACGATGA AGATACTACA CTAATGGAGG AATATTCCGG CAACCACCAC CACATGGGTC TATCGGAGAA GAAGAGAAGA TTAAAAGTTG ACCAAGTCAA AGCTCTTGAG AAGAATTTCG AACTTGAGAA CAAACTCGAG CCTGAGAGGA AAACGAAACT AGCACAAGAG CTTGGACTTC AACCTCGTCA AGTAGCGGTT TGGTTTCAGA ACCGTCGTGC ACGGTGGAAA ACAAAACAGC TTGAGAAAGA TTACGGCGTT CTTAAGAGCC AATACGATTC TCTCCGCCAC AATTTCGATT CTCTCCGCCG TGACAACGAT TGTCTTCTCC AAGAGATTAG TAAAATCAAA GCTAAGATAA ACGGAGAAGA AGATAACAAC AACAACAAAG TTGCGACGGA GAGCGTTAAG GAAGAAGAAT TTCACAAGAC GAATTCAATT CCGTCGTCTC CTCTGCAGTT TCTAGAACAT TCCTCTGGTT TTAACTACCG GCGAAGCTTC ACTGACCTCC GTGACCTTCT ACCGAATTCC ACCGTTGTCG AGGCTGGATC TTCCGATAGT TGCGATTCAA GCGCTGTTCT TAACGACGAA ACGAGCTCTG ACAACGGAAG ATTGACGCCG CCCGTGACGG TAACCGGCGG GAGTTTCTTA CAGTTTGTGA AAACGGAGCA AACAGAGGAT CACGACGATT TTCTAAGCGG TGAAGAAGCT TGTGGTTTCT TCTCCGATGA ACAACCTCCG TCACTTCATT GGTACTCTGC TTCGGATCAT TGGACTTGAG AGTGCTCTGT TTTACTCTAT GTGGAAAAAC AGAACAGAGG GCAAAAGTGG AATTATCAAT AAATAAGGAT TATTAAATTA ACTCAGCGGG AGAAGTTAAT TTGGGTTTAA GATTGTAATG GCTCTTAGTG TAATTAACGA TCGAGAGGGG CTTTCACAGA AATAGGA 
Length1297
Protein Sequence
Protein Residue
Map Locationscaffold_7: 831339.. 832896
Download Sequence
A.thaliana
AGI-codeAT4G40060.1
Descriptionhomeobox protein 16
TAIR curator summaryEncodes a homeodomain leucine zipper class I (HD-Zip I) protein.
Alias[ATHB-16][ATHB16][HB16][homeobox protein 16]
Gene coexpression
MR
MR Locus Description
14.2829 Ahg944000 alpha/beta-Hydrolases superfamily protein
15.5563 Ahg893724
17.088 Ahg488277 CCT motif family protein
18.868 Ahg926057
21.5407 Ahg495072 ferric reduction oxidase 8
22.2711 Ahg495865 glutamine dumper 3
22.3159 Ahg480885 HSP40/DnaJ peptide-binding protein
22.6936 Ahg471309 Protein of unknown function, DUF584
22.8035 Ahg898699 Insulinase (Peptidase family M16) family protein
24.7386 Ahg925998 Galactose oxidase/kelch repeat superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression