Detail



ID : Ahg491099

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491099|fgenesh2_kg.7__532__AT4G35480.1
Sequence
ATTATAACTT GGATCAGATT CTTCTTCTTC TCTAAACAAC AACAAAATTT CTTCCCTCTG TCTTTCACAA CTTTCCTCTT TCTCTAAAGA CAAAACTCAA AATCAAAACA AAATGACTCG CTCCTCTAGA TTCCTTGGTA CGGCGTCGCC TCCACCGCCG GAAGAAATCC TCGCCGCCGA AACCGACATG GTTGTGATTC TCTCAGCCCT TCTCTGCGCT CTCATATGCA TAGCCGGCTT AGCCGCCGTA GCTCGCTGCG CTTGGCTCCG CCGTCTCACC GGCGCTAATT CCGCCGCCGT CGGAGAATCA CCGCCGCCGA ACAAAGGCCT CAAGAAAAAA GCACTTCAAG CTCTCCCTAA ATCAACTTAC ACCGCCTCTG CTTCTACCGC CACCGCCGCA GATGATTTAT CATGCTCCTC CGGCGGAGAA GGAGATTCAT CCACCGAGTG TGCGATATGC ATAACGGAAT TTTCCGACGG CGACGAGATC AGGATCTTAC CGCTGTGTAG TCACGCCTTC CACGTGGCGT GTATAGATAA ATGGTTGACT TCACGGTCGT CGTGTCCTTC TTGTCGTCGG ATATTGGTGC CGGTGAAGTG TGATAGGTGT GGCCACCATG CTTCCACGGC GGAGACTCAG ATCAAAGATC AACCTCCTCA TCACCAACAT CCTTCACAGT TCACTTCCGC CATTATTCCT GCTTTTCTTC CTTGAGATTT TCACTTTATT TATTTTTATA ATTTGCTAAA AATATCGGCA TGATTAAAGA AAAGTAAAGT TCTAATTAAT TAGGAATTAG TGTGATCTTT AGTTACTTCG ATTTTTCTCC ACTGTAATCC ACTGTTATGA ATTAATCAGA TGAAA 
Length865
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2166777.. 2167659
Download Sequence
A.thaliana
AGI-codeAT4G35480.1
DescriptionRING-H2 finger A3B
TAIR curator summaryEncodes a putative RING-H2 finger protein RHA3b.
Alias[RHA3B][RING-H2 finger A3B]
Gene coexpression
MR
MR Locus Description
10.9545 Ahg472202 purine permease 14
13.1909 Ahg482857 WRKY DNA-binding protein 33
17.5214 Ahg951204
21.4243 Ahg471608 protein kinase 2A
23.0217 Ahg924051 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
29.4958 Ahg472978 salt tolerance zinc finger
30.1496 Ahg946262 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
34.7851 Ahg480060 MATE efflux family protein
40.1497 Ahg471476 autoinhibited Ca2+/ATPase II
45 Ahg492487 WRKY family transcription factor
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression