Detail



ID : Ahg491312

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491312|fgenesh2_kg.7__745__AT4G33680.1
Sequence
GGAAAAATGT CGTCAACCCA TCAGTTAGTT TCTTCGATGA TCTCTTCTTC CTCATCTACT TTCCTAGCCC CTTCAAATTT CAATCTCAGA ACTCGAAATG CTTGCTTACC TATGGCAAAA CCGGTCAATA CTTGCAAATG CGTTGCAACG CCGCAAGAGA AGATTGAGTA TAAGACGAAG GTGTCACGGA ATTCAAACAT GTCCAAACTT CAGGCTGGAT ACCTATTCCC GGAGATTGCA AGACGAAGGT CTGCACACTT GTTGAAATAT CCAGATGCAC AAGTTATAAG TCTTGGAATA GGCGACACAA CTGAGCCAAT TCCTGAAGTG ATCACTTCTG CTATGGCAAA GAAAGCTCAT GAGTTGTCAA CAATAGAGGG ATATAGTGGT TATGGTGCTG AACAAGGTGC AAAGCCACTG AGAGCTGCTA TTGCGAACAC ATTCTACAGT GGCCTTGGCA TAGGGGATGA TGACGTTTTT GTTTCTGATG GAGCTAAATG TGATATCTCA CGTCTCCAGG TTATGTTTGG TTCCAATGTT ACAATTGCTG TTCAGGATCC TTCATATCCG GCTTATGTCG ACTCCAGTGT TATTATGGGT CAGACTGGGC AATTTAACAC TGATTTGCAA AAGTATGGAA ACATCGAGTA CATGAGATGC ACTCCAGAGA ATGGCTTCTT TCCCGACTTG TCCACTGTTG GCAGGACAGA TATAATTTTC TTCTGTTCCC CAAATAACCC TACGGGTGCT GCTGCCACGA GAGAGCAACT AAAGCAGTTA GTTGAGTTTG CAAAGAAGAA CGGTTCTATA ATAGTGTATG ATTCCGCCTA TGCAATGTAC ATGTCTGATG ATAACCCACG ATCCATCTTC GAAATCCCTG GAGCAGAGGA GGTCGCTATG GAGACAGCTT CGTTCAGCAA ATATGCTGGT TTCACTGGAG TTCGACTTGG TTGGACTGTC ATCCCGAAAC AGCTACTCTA TTCAGACGGT TTCCCTGTTG CCAAAGACTT CAATCGGATT ATCTGCACTT GTTTCAATGG TGCATCTAAT CTCTCACAAG CTGGTGCTCT TGCTTGCCTT ACACCTGAAG GACTTGAGGC AATGCACAAG GTGATTGGAT TCTATAAAGA AAACACAAAC ATAATCATTG ACACATTCAC ATCTCTCGGG TATGATGTAT ATGGAGGAAA GAATGCGCCT TACGTATGGG TTCACTTCCC GAACCAAAGC TCATGGGATG TGTTTGCTGA GATTCTGGAG AAGACTCATG TGGTTACAAC TCCAGGAAGT GGGTTTGGAC CAGGTGGTGA AGGGTTCGTC CGTGTCAGTG CCTTTGGTCA CAGAGAGAAC ATCTTAGAGG CATGTCGAAG ATTCAAGCAG CTTTACAAAT GAAGAACCTT GTTTTGTAAT CGTTCCTCAT CATCATCACC CTCTTTTATG ACATGATTTG AGTTAAAATA ATGTCGTCTC CATTGTTTTC TGGAATTTGT AGA 
Length1493
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2961241.. 2964121
Download Sequence
A.thaliana
AGI-codeAT4G33680.1
DescriptionPyridoxal phosphate (PLP)-dependent transferases superfamily protein
TAIR curator summaryInvolved in disease resistance against Pseudomonas syringae. mutants have elevated SA levels, a low level of spontaneous cell death, callose deposition, and enlarged cells in leaves. genetically maps on chr 4 between L23H3 and nga1139.
Alias[AGD2][ABERRANT GROWTH AND DEATH 2]
Gene coexpression
MR
MR Locus Description
5.09902 Ahg940852 nascent polypeptide-associated complex subunit alpha-like protein 3
9.27362 Ahg473719
9.8995 Ahg489891 Nascent polypeptide-associated complex (NAC), alpha subunit family protein
11.0905 Ahg486090 HIS triad family protein 3
11.3137 Ahg487529 Ribosomal protein S4 (RPS4A) family protein
11.4891 Ahg358545 RNA-metabolising metallo-beta-lactamase family protein
14.0712 Ahg493599 Peptidase M50 family protein
14.8997 Ahg938259 Tetratricopeptide repeat (TPR)-like superfamily protein
16.6132 Ahg933884 gamma subunit of Mt ATP synthase
16.7332 Ahg470715 translocon at the inner envelope membrane of chloroplasts 110
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression