| Annotation |
|---|
| Description | jgi|Araly1|491430|fgenesh2_kg.7__863__AT4G32770.1 |
| Sequence |
TCTTCTATTA TGGAGATACG GAGCTTGATT GTTTCTTTGA ACCCTAATTT CTCTTCCTTT GAGCTCTCTC GCCCTGTCAC TCGCTCACTC CGATCGGCTA AACTAGTTCC CCGCTCCATT TCTAGGGTTT CGGCGTCGAT CTCCACTCCG TCCTCTGACA CTGACAAGAT CTCCGTGAAA CCTGTTTACG TCCCGACGCC CCCCAATCGT GAGCTCCGGA CTCCTCACAG TGGATACCAT TTCGATGGAA CAGCTAGGAA GTTCTTCGAG GGATGGTATT TCAGGGTTTC AATTCCAGAC AAGAGGGAGA GTTTTTGCTT TATGTATTCT GTGGAGAATC CTGCATTTCG CCAGAGATTG TCACCATTGG ATGTGGCTCT TTATGGACCT AGATTCACTG GTGTCGGAGC TCAGATTCTT GGCGCTAATG ATAAATATTT ATGCCAATAC ACGCAAGAGT CTCACAACTT CTGGGGAGAT CGACATGAGC TAGTTTTGGG GAATACTTTT AGTGCTGTGC CAGGCGCAAA GTCTCCAAAC AAGGAGGTTC CACCAGAGGA ATTTAACAGA AGGGTGTCCG AAGGGTTCCA AGCTACCCCA TTTTGGCATC AAGGTCACAT TTTCGATGAT GGCCGGACTG ACTATGCGGA AACGGTGAAA TCTGCTCGTT GGGAGTATAG TACTCGTCCT GTTTACGGTT GGGGTGATGT TGGGGCCAAA CAGAAGTCTA CTGCAGGCTG GCCTGCAGCT TTTCCTGTAT TTGAGCCTCA TTGGCAGATA TGCATGGCAG GAGGCCTGTC CACAGGGTGG ATAGAATGGG GCGGTGAAAG GTTTGAGTTT CGGGATGCAC CTTCTTATTC AGAGAAGAAT TGGGGTGGAG GCTTCCCAAG AAAATGGTTT TGGGTCCAGT GTAATGTCTT TGAAGGGGCA AGTGGAGAAG TTGCTTTAAC CGCAGGTGGC GGGTTGAGGC AGTTGCCTGG ATTGACTGAG ACCTATGAAA ATGCTGCACT GGTTTGTGTA CACTATGATG GAAAATTGTA CGAGTTTGTT CCGTGGAATG GTGTTGTTAG ATGGGAAATG TCTCCCTGGG GTTATTGGTA TATAACTGCA GAAAATGAGA CCCATATGGT GGAACTAGAG GCAAGAACAA ATGAAGCGGG TACACCTCTG CGTGCTCCTA CCACAGAAGT TGGGCTAGCA ACGGCTTGCA GAGATAGTTG TTACGGTGAG TTGAAGTTGC AGATATGGGA ACGGCTATAT GATGGAAGTA AAGGCAAGGT GATATTAGAG ACAAAGAGCT CAATGGCAGC GGTGGAGATA GGAGGAGGAC CGTGGTTTGG GACATGGAAA GGAGATACAA GCAACACCCC CAAGCTACTC AAACAGGCTC TTCAGGTCCC ATTGGATCTT GGAAGCGCCT TAGGTTTGGT CCCTTTCTTC AAGCCACCGG GTTTGTAACA TTGATGAGTG TTTTGTTTGT TGATAGAGAA GTTATGTCAT TGCTAGCTTC ACTAATCTGT ATGATTTAGT TCGTTCGGTC CTTGTGGTAA ATTATACGGG CCAGTGTAAA GTCTAGTTCA ATAAA |
| Length | 1585 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 3417354.. 3420051 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G32770.1 |
| Description | tocopherol cyclase, chloroplast / vitamin E deficient 1 (VTE1) / sucrose export defective 1 (SXD1) |
| TAIR curator summary | Tocopherol cyclase involved in tocopherol (vitamin E)synthesis. VTE1 over-expressing plants have increased tocopherol indicating VTE1 is a major limiting factor in tocopherol synthesis. Mutants defective in this gene accumulate high amounts of zeaxanthin in conditions of high light or low temperature. Plays a role in the adaptation to low temperature stress, notably phloem loading. |
| Alias | [ATSDX1][VTE1][SUCROSE EXPORT DEFECTIVE 1][VITAMIN E DEFICIENT 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg330043 | Chlorophyll A-B binding family protein |
| 5.74456 |
Ahg493949 | Raffinose synthase family protein |
| 7.4162 |
Ahg946646 | phytochrome D |
| 7.61577 |
Ahg490080 | plant UBX domain containing protein 4 |
| 8.3666 |
Ahg494873 | Aldolase-type TIM barrel family protein |
| 8.3666 |
Ahg949787 | low-temperature-responsive protein 78 (LTI78) / desiccation-responsive protein 29A (RD29A) |
| 8.60233 |
Ahg485645 | |
| 9.8995 |
Ahg917411 | autoinhibited Ca2+ -ATPase, isoform 8 |
| 10.247 |
Ahg350602 | high affinity nitrate transporter 2.7 |
| 10.7703 |
Ahg488447 | stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
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