| Annotation |
|---|
| Description | jgi|Araly1|491653|fgenesh2_kg.7__1086__AT4G30950.1 |
| Sequence |
AAGTCCAATT TTCTCAAGAA GGTTGAAGAG GTGAGGGCTC TTCACAGCCA TTCAATCTCA TAAAACATAT TGCCGGAGAA ACTCTCGGGG GTCGCTTCTT CTGCATTTTC TCCGTCCTGT CCAATGGCTT CCAGAATTGC TGATTCTCTC TTCGCCTTCA CGGGCCCACA ACAATGTCTT CCTAGGGTTC CTAAGCTTGC AGCTTCTGCT CGTGTTTCTC CTGGTATATA TGCTGTGAGG CCGATTGATC TTCTTTTAAA AGGAAGCACC CGTCGAAGTA GAAGATGTGT AGCTCCTGTG AAAAGGAGGA TTGGATGTAT CAAAGCGGTG GCTGTTCCAG TCGCACCGCC TTCAGCTGAC AGTGCAGAAG ATAGGGAACA ATTAGCAGAA AGCTATGGAT TCAAACAAAT TGGAGAAAAT CTTCCTGATA ATGTCACTTT AAAAGATATC ATGGATACAC TTCCCAAAGA GGTGTTCGAG ATTGATGATT TGAAAGCATG GAAGTCTGTG TTGATATCTG TGACTTCTTA CACTTTGGGG CTCTTCATGA TTGCAAAAGC GCCGTGGTAT CTGCTACCGT TGGCTTGGGC ATGGACAGGA ACTGCAATTA CCGGGTTCTT TGTGATAGGT CATGATTGTG CACATAAGTC ATTCTCAAAG AACAAATTGG TGGAAGACAT TGTGGGTACT CTCGCCTTCC TACCACTTGT CTACCCATAT GAGCCTTGGC GGTTTAAGCA CGACCGTCAT CACGCCAAAA CCAACATGTT AGTTCATGAC ACAGCTTGGC AGCCAGTTCC ACCAGAGGAG TTTGATTCAT CACCCGTGCT GCGAAAGGCA ATCATTTTTG GATATGGGCC AATTAGACCT TGGTTGTCCA TAGCTCACTG GGTGAACTGG CACTTCAATC TGAAAAAGTT CAGAGCGAGC GAGGTGAATA GGGTGAAGAT AAGTTTGGCT TGTGTTTTCG CCTTCATGGC CGTTGGGTGG CCACTGATCG TATACAAAGT TGGTTTGTTG GGATGGGTAA AATTCTGGTT AATGCCGTGG TTGGGCTATC ACTTCTGGAT GAGCACATTC ACAATGGTTC ATCATACGGC TCCACACATT CCATTCAAGC CTGCGGATGA GTGGAACGCG GCTCAGGCCC AGCTGAATGG AACTGTTCAT TGTGATTACC CTAGTTGGAT TGAAATTCTC TGCCATGATA TCAACGTTCA CATCCCGCAT CATATCAGCC CAAGAATACC AAGCTACAAT CTCCGTGCAG CTCATGAGTC TATACAAGAG AACTGGGGAA AGTATACAAA CTTGGCTACA TGGAACTGGC GCTTGATGAA AACGATAATG ACTGTGTGTC ATGTCTATGA CAAAGAGGAG AACTACATTC CTTTTGACCG GTTAGCCCCT GAAGAATCTC AGCCAATAAC CTTCCTCAAG AAAGCAATGC CTAACTACAC AGCCTGATTC GCCCTGGTCT CGAACTGGTC TTTTGAAATC TCAATATCTT TTTGCAGTCG CGGATGTTAT ATGTAAGCTT TTCGAGCGAT AAGCTTCTCT AACACTTCAC CAACGCTTTA TACTGTTATT TTTTTCCAAT CTTATCAGAA GAGAGAAACT GGTCAAATTA TCTCAGCACT TGCAATTCTT TTATCAGTTT CTTAGCTATA AGAAGATTAA ACAGTCTACA TAGTTTGCAA TGTACTGTAG TGTGATGAAA ACTTAGTAGA TGAGAATCTT TGAAGATATA TACATCATCT ACTTACTGT |
| Length | 1769 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 4277536.. 4280385 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G30950.1 |
| Description | fatty acid desaturase 6 |
| TAIR curator summary | Chloroplastic enzyme responsible for the synthesis of 16:2 and 18:2 fatty acids from galactolipids, sulpholipids and phosphatidylglycerol. Uses ferredoxin as electron donor. Gene mutation resulted in reduced level of unsaturated fatty acids leading to susceptibility to photoinhibition. |
| Alias | [FAD6][FADC][SFD4][fatty acid desaturase 6][FATTY ACID DESATURASE C][STEAROYL DESATURASE DEFICIENCY 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 11.9164 |
Ahg486548 | Transketolase |
| 17.4929 |
Ahg486816 | chloroplast stem-loop binding protein of 41 kDa |
| 17.6068 |
Ahg488807 | ADP glucose pyrophosphorylase large subunit 1 |
| 17.8885 |
Ahg940745 | dicarboxylate transporter 1 |
| 22.8473 |
Ahg474689 | Phosphoglycerate kinase family protein |
| 24.454 |
Ahg932140 | |
| 31.241 |
Ahg473113 | Ribosomal protein L34 |
| 31.273 |
Ahg484572 | ribosomal protein L12-A |
| 32.249 |
Ahg484431 | glyceraldehyde 3-phosphate dehydrogenase A subunit |
| 32.7872 |
Ahg494297 | Mitochondrial substrate carrier family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|