Detail



ID : Ahg491776

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491776|fgenesh2_kg.7__1209__AT4G29820.1
Sequence
GCGGAGAAGG ACTCTCTGAA GCCGCCACGT CTCAGTGATC CGACTACGAC ACCTTTCTTC ACTCTTCTTC TTGCGTCTTC TCTGCTTTTA GGGTCTCTCT GTTATTTAAT TTTAATCCAT CGAGATCGCT TTTAGCTCTC TATCTTTGAA TTTTCCGGGA AAAAAAAATG GGAGAAGAAG CTCGAGCTTT AGATATGGAG GAGACCAGTG AAGAGAGCAC GACGAGAAGA AACCATGTCG TTCATGACTT TATGGTTGAT TTATACCCGC TTAGCAGCTA CTACTTCAGT TCAAGAGACG CTCTTCGCGT CAAGGACGAG ATTATCTCTG ATCGGGTCGT CAGATTGAAA TCCAATTATG CTGCTCATGG ATTGAGAACT TGCGTTGAAG CTGTTCTTCT GGTTGAGTTA TTCAAGCATC CTCATGTTTT GCTTCTTCAA TATAGAAACT CTATTTTCAA GCTTCCTGGT GGTCGTTTAA GACCTGGAGA ATCAGATATT GAAGGTGTAC AACGGAAACT AGCATCAAAG CTATCGGTTA ACGAAAATGT CGTTGTTCCG GGTTTAGAGG TAGGGGAATG TATTGGGATG TGGTGGAGAC CCAACTTTGA GACATTGATG TATCCTTTCT TGCCACCTAA TGTAAAACAC CCAAAGGAAT GCACAAAGCT TTTTCTTGTG AGATTACCGG TACATCAACA GTTTGTCGTA CCTAAGAACT TCAAACTCCT CGCTGTTCCA TTGTGTCAAC TCCATGAAAA TGAAAAGACT TATGGGCCGA TCATATCGCA AATTCCCAAG CTTCTTTCAA AATTCTCCTT CAACATGATG GAGATATGAA CGAACCTCAT AATCATTGCC TCTAGTAGCT CTTGCCCGCA ATTTGTGATA GGATTATATG TTCGGGGAAA TCGTTTGTGG AGCCTCTGTG AGTCTGTGAC TATGTAAATG TATATAGGGC TTACAATATA TAGACAATGT TGAAGAATAG CATGTTCTTG TTGGTTATAG AGACTAGACA TGAAGTATGA TTGATAGATA GATTATTTTC TTTGTGTGAT TATTT 
Length1065
Protein Sequence
Protein Residue
Map Locationscaffold_7: 4784315.. 4786018
Download Sequence
A.thaliana
AGI-codeAT4G29820.1
Descriptionhomolog of CFIM-25
TAIR curator summaryEncodes a homolog of the protein CFI-25, a polyadenylation factor subunit.
Alias[ATCFIM-25][CFIM-25][ARABIDOPSIS THALIANA HOMOLOG OF CFIM-25][homolog of CFIM-25]
Gene coexpression
MR
MR Locus Description
32.6343 Ahg496313 small G protein family protein / RhoGAP family protein
61.3025 Ahg494627 Pseudouridine synthase/archaeosine transglycosylase-like family protein
77.846 Ahg337666 cellulose synthase like E1
82.6438 Ahg480666
82.9216 Ahg491332 metallo-beta-lactamase family protein
87.0862 Ahg941131 Protein of unknown function, DUF538
87.8635 Ahg941035 Ankyrin repeat family protein
91.433 Ahg474975 ubiquitin-conjugating enzyme 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression