Detail



ID : Ahg491946

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|491946|fgenesh2_kg.7__1379__AT4G28270.1
Sequence
TGTGTATAAT AAGGTTTCAT GCTTCTGCAC CACCCTCGAT CTATATATTC TTACCCCATT CTCTAAACAC AAATAAATCT TTTTCTCTGT TCTTTGACCA TTGTCGCATG AACCAATACA AGCTCTCTGA AGTTTCCAAA GGCTCAAAGA CAGAAGAGAT CTATCGGTAC TTGCAATCTT TCCAAAGATA AAATGGAGAT AGAGAATGAT GAGAACGACA CAACATTGGT TGATTCTGGA GGAGACTTCG ACTGCAACAT ATGCTTGGAT CAGGTTCGAG ACCCGGTCGT GACTTTATGT GGCCACTTGT TTTGTTGGCC CTGCATTCAC AAGTGGACTT ATGCCTCCAA CAATTCAAGA CAACGCGTCG ATCAATACGA TAGTAAGAGG GAACCACCAA AATGTCCGGT ATGCAAATCC GATGTCTCCG AGGCTACGCT TGTTCCGATC TACGGCCGAG GACAGAAAAC TCCCCAGTCC GGTTCAACCG TACCGAGTAG ACCATCCGGT CCGGTTTATG ACTTAAGAGG AGTTGGTCAA CGTTTGGGAG AAGGGGAGAG TCAACGGTAC ATGTATAGAA TGCCTGATCC GGTGATGGGT GTGGTATGCG AAATGGTATA CCGGAGACTA TTTGGAGAGT CTTCGAGCAA CATGGTACCT TACCGTGACA CAAATGTCCG GTCGAGGCGA CGGGCAATGC AAGCTGAGGA GTCACTAAGC AGAGTCTACT TGTTCCTACT TTGCTTCATG TTTATGTGTC TGCTTCTCTT CTAATTATGA TATATATATG TATATAATAT ACCAATTGGA ATGAGTATGC ATATATGTAA TAACA 
Length835
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5451529.. 5452970
Download Sequence
A.thaliana
AGI-codeAT4G28270.1
DescriptionRING membrane-anchor 2
TAIR curator summaryEncodes a RING finger E3 ubiquitin ligase. Binds and ubiquitinates ABP1 in vivo and in vitro.
Alias[ATRMA2][RMA2][RING membrane-anchor 2]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg476684 bifunctional nuclease in basal defense response 1
4.47214 Ahg949485 ferric reduction oxidase 7
4.79583 Ahg471309 Protein of unknown function, DUF584
5 Ahg484952 homolog of Medicago truncatula MTN3
5.47723 Ahg926058
5.65685 Ahg481314 FAD-dependent oxidoreductase family protein
6.7082 Ahg949484 ferric reduction oxidase 6
8 Ahg482229 TRAF-like family protein
8.12404 Ahg350224 Domain of unknown function (DUF966)
8.66025 Ahg492886 phloem protein 2-A1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression