Detail



ID : Ahg492072

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492072|fgenesh2_kg.7__1505__AT4G27260.1
Sequence
CTCACACACT AAAAGCTTGC AAAAACCATA AGCTTATCTC TCTCACAAAT CATTTTTTTC AAACTTCTCT CTCTCTTAAA CCATGCCTGA GGCACCAAAG AAGGTATCTT TAGAGGTTTT TGATCTGACG CTTGACCAAA AAAACAAGCA AAAGCTTCAG TTGATCGAAG AACTTACCTC TAACGCCGAC CAATTCCAGA GACGTGTCTT GGAGGAGATC TTGTCCCGCA ATGCTGACGT GGAGTATCTC CGGCGACACG ACCTCAACGG TCGCACTGAC CGAGAGACCT TCAAAAACGT CATGCCGGTT ATCACCTACG AAGATATTCA GCCTGAGATC AACAGGATCG CTAATGGTGA TAAATCACCT ATCCTCTCTT CAAAACCCAT CTCTGAGTTT CTCACAAGCT CTGGGACATC TGGTGGGGAG AGGAAGCTAA TGCCAACAAT CGAAGAGGAA CTAGACAGAA GATCTCTCCT CTACAGTCTC TTGATGCCTG TGATGAGCCA GTTTGTTCCT GGTCTCGAAA ATGGCAAAGG AATGTATTTC TTGTTCATCA AGTCCGAATC CAAGACACCA GGAGGCCTCC CTGCTCGTCC CGTCTTAACC AGCTACTACA AGTCTTCCCA TTTCAAAGAA AGACCCTATG ATCCTTACAC CAACTACACA AGCCCTAACG AGACCATCCT TTGCTCTGAC TCTTACCAGA GCATGTATTC TCAGATGCTC TGTGGCTTAT GTCAACACCA GGAGGTTCTT CGAGTCGGCG CTGTCTTCGC CTCTGGATTC ATCAGAGCCA TCAAGTTTCT AGAGAAACAC TGGACAGAGT TGGTCCGTGA CATCAGAACC GGTACTCTGA GTTCCCTCAT AACTGATCCT TCCGTTCGCG AGGCGGTCTC CAAGATCCTT AAACCGAATT CAAAGCTCGC TGAGTTTGTG GAATTTGAGT GCAAGAAGTC GTCCTGGCAA GGGATTATTA CTAGGCTGTG GCCTAACACA AAGTATGTGG ATGTGATTGT GACCGGGACA ATGTCTCAAT ACATTCCAAC TTTGGACTAC TACAGTAATG GCTTGCCTCT TGTCTGCACA ATGTATGCTT CTTCCGAGTG TTACTTTGGT GTGAATCTAA GGCCACTCTG CAAACCATGC GAGGTCTCAT ACACGCTCAT ACCATCCATG GCTTATTTCG AGTTCTTGCC TGTTCACAGA AACAACGGTG TTACTAACTC CATCAACCTT CCTAAAGCAC TCACTGAGAA AGAGCAACAA GAGCTTGTTG ATCTAGTTGA TGTCAAGCTT GGTCAGGAAT ACGAGCTTGT TGTCACCACT TACGCTGGGC TTTGCAGATA CCGAGTTGGT GATTTATTGA GAGTGACTGG ATTCAAGAAC AAAGCGCCTC AATTCAGTTT CATATGTCGC AAGAATGTGG TCTTGAGCAT AGATGCCGAC AAGACCGATG AGGTTGAACT TCAGAACGCG GTGAAGAACG CAGTGACACA CCTCGTCCCA TTTCATGCCT CACTCTCTGA GTACACGAGC TATGCAGACA CAAGTTCTAT CCCGGGCCAT TATGTCCTGT TCTGGGAGCT ATGTTTGGAT GGAAACACAC CGATCCCTCC ATCGGTCTTT GAGGATTGCT GCTTAACTGT AGAAGAGTCG TTCAACACTG TTTATAGACA AGGAAGGGTT AGTGACAAGT CCATAGGCCC GCTTGAGATC AAGATTGTTG AGCCAGGGAC ATTCGATAAG CTCATGGATT ACGCGATCAG CTTGGGAGCA TCGATTAATC AGTATAAGAC GCCGAGATGT GTGAAGTTTG CTCCAATCAT CGAGCTATTG AACTCGAGGG TTGTTAATAG TTACTTAAGC CCCAAGTGTC CTAAATGGGT CCCTGGTCAC AAACAGTGGG GAAGTAACTA AGATGGAATG TGGAACGTGA AGAGACTCTC TTTGAGCTAG AAGGTTTGGG ACTTGGACTT GCAAATGATG ATGTCTTCTC TAATCTTAAT TTTAGTTTAA TCTTTTGTTC TTTTTTTTTG TTATCCTTTT AATATGCATA GTCCCTCTGG ATTTGAAAAG CAGTTGTACA AAAGGCAAAT CATGTTTTCT CCAACCAACT CTCATCACTT TCTCGAGCCT CTAAATCTTT CTATTGTTTA GTGCGTAATT GTTTGGACTT TTATCATTTA CAAGCAACGT CAAATTGCAA ATTGCTAGGA TGATTTT 
Length2227
Protein Sequence
Protein Residue
Map Locationscaffold_7: 5870928.. 5873560
Download Sequence
A.thaliana
AGI-codeAT4G27260.1
DescriptionAuxin-responsive GH3 family protein
TAIR curator summaryencodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin.
Alias[GH3.5][WES1]
Gene coexpression
MR
MR Locus Description
19.5959 Ahg890129 PEBP (phosphatidylethanolamine-binding protein) family protein
45.5741 Ahg945592
49.4975 Ahg476978
57.2101 Ahg481697 Major facilitator superfamily protein
63.9687 Ahg949481 Predicted AT-hook DNA-binding family protein
67.082 Ahg495830 villin, putative
67.3053 Ahg477695 Calcium-dependent lipid-binding (CaLB domain) family protein
67.3869 Ahg493941
70.3136 Ahg901222 homeobox-3
85.557 Ahg950420
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression