Detail



ID : Ahg492580

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492580|fgenesh2_kg.7__2013__AT4G22880.1
Sequence
ACTTGCAACC AATTACAAAA ATAAGCTTTA AACGAAGAAG ACAAAGAAGA TGGTTGCGGT TGAAAGAGTT GAGAGTTTAG CAAAGAGCGG AATCATATCC ATTCCAAAAG AGTACATTCG TCCCAAAGAA GAGCTCGAGA GCATCAACGA CGTTTTCCTA GAAGCGAAGA AAGAAGACGG TCCTCAAGTT CCTACAATCG ATCTACAAAA CATCGAGTCA GAAGATGAAA AGATCCGTGA GACTTGCATT GAGGAACTGA AAAAGGCAGC TTTGGATTGG GGAGTGATGC ATTTGATCAA CCATGGAATA TCTGTTGATC TAATGGAGCG TGTGAAGAAA GCCGGGGAAG AGTTTTTCGG TTTGTCCGTG GAAGAGAAGG AGAAGTATGC GAACGATCAA GCCACAGGAA AAATTCAAGG GTATGGAAGT AAGTTAGCTA ACAACGCTTG CGGACAATTG GAATGGGAAG ATTACTTCTT TCATCTTGTG TATCCTGAAG ACAAGAGAGA TCTATCACTT TGGCCTACGA CACCAAGTGA TTACATAGAA GCAACGAGTG AGTACGCGAA GTGTCTTCGT TTGTTAGCAA CAAAAGTCTT CAAGGCTCTC TCTATTGGTC TAGGCTTAGA GCCTGACCGT CTAGAGAAAG AAGTTGGTGG TTTAGAAGAG CTTCTTCTAC AAATGAAGAT AAATTACTAT CCAAAATGTC CTCAGCCTGA GCTAGCACTC GGTGTGGAAG CTCACACCGA TGTAAGCGCT TTAACCTTCA TTCTACACAA CATGGTTCCC GGTTTGCAGC TATTCTACGA GGGAAAATGG GTCACTGCAA AATGTGTTCC TGATTCGATT GTGATGCACA TTGGAGATAC TTTAGAGATT CTTAGTAATG GGAAGTATAA GAGTATACTT CATCGCGGGT TGGTGAATAA GGAGAAGGTT AGGATTTCTT GGGCTGTGTT TTGTGAGCCA CCAAAGGATA AGATTGTTCT TAAGCCGTTG CCGGAGACGG TGAGTGATGA GTCTCCGGCT AAGTTTCCTC CAAGGACATT TGCTCAACAT ATTGAGCATA AGTTGTTTGG GAAGGAACAA GAGGAATTGG TATCTGAGAA AAAGAATTAA GTTTGTGTGT TTAGTCTTAT 
Length1140
Protein Sequence
Protein Residue
Map Locationscaffold_7: 7851167.. 7852453
Download Sequence
A.thaliana
AGI-codeAT4G22880.1
Descriptionleucoanthocyanidin dioxygenase
TAIR curator summaryencodes leucoanthocyanidin dioxygenase, which is involved in proanthocyanin biosynthesis. Mutant analysis suggests that this gene is also involved in vacuole formation.
Alias[ANS][LDOX][TDS4][TT18][ANTHOCYANIDIN SYNTHASE][leucoanthocyanidin dioxygenase][TANNIN DEFICIENT SEED 4]
Gene coexpression
MR
MR Locus Description
2.64575 Ahg494741 dihydroflavonol 4-reductase
3.4641 Ahg947001 UDP-Glycosyltransferase superfamily protein
5.2915 Ahg495482 UDP-glucose:flavonoid 3-o-glucosyltransferase
5.47723 Ahg488585 glutathione S-transferase phi 12
5.91608 Ahg359227 dihydroflavonol 4-reductase
6.48074 Ahg484714 HXXXD-type acyl-transferase family protein
7.93725 Ahg919016 HXXXD-type acyl-transferase family protein
7.93725 Ahg487632 Cytochrome P450 superfamily protein
8 Ahg932271 serine carboxypeptidase-like 10
9.48683 Ahg470369 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression