Detail



ID : Ahg492856

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|492856|fgenesh2_kg.7__2289__AT4G20130.1
Sequence
CTAAACCCAT TTTCTTCAGT TGAGGAATGG CTTCTTCAGT CTCTCTTCAG TACCTGACCA ACACCTTTAT CTCCAAACCT CAGGGTTTCT GCAACGGAAT TGTGTCAGCA CCAAGACCCA GAAGCAATTT CATAAGAGAC AGACAAAATG GTGTCCGACC CATCAAAGTT ACTTCTCTTG AGACACAACC TTTCCCTCTG TTTCAATCTC CTGCTTCAGA AGAATCTTCC TCGTCCGAGT TGGAGCCAGC AGATCCGGAT TTCTACAAAA TTGGGTATGT TCGAAGTGTG AGAGCTTATG GAGTTGAGTT TAAAGAAGGT CCAGATGGTT TTGGTGTTTA TGCTTCTAAG GATATTGAAC CTCGCCGTCG AGCTAGAGTG ATAATGGAGA TTCCTCTTGA ATTGATGATA ACCATTAGAC AGAAGCATCC TTGGATGTTT TTCCCTGATA TTGTGCCAAT TGGTCATCCT ATTTTCGATA TCATTAACTC GACTGATCCT GAGATTGATT GGGATATCAG ATTGGCGTGT CTTCTGTTAT TCTCTTTTGA TCGGGATGAT CACTTCTGGC GACTCTATGG CGATTTCCTT CCTGCTGCTG ATGAGTGCAG CAGCCTGCTT CTAGCTACAG AGGAAGACCT TGCGGAGCTT CAAGATCCTG ATCTTGTTTC AACTATTAGA CAACAGCAGA AACGAGTCCT AGAATTTTGG GAAAAGAATT GGCATTCAGG TGTTCCTCTC AAAATCAAAA GGCTTGCCGA GGATCTAGAA AGATTTATAT GGGCAGTTAG TATCGCACAG ACACGATGCA TTAGTATGCA AACTAGGATC GGTGCTTTGG TTCAGGAATT AAATATGATG ATTCCTTATG CTGACATGCT AAACCACTCC TTTGAACCAA ACTGTTTCCT ACATTGGCGT CCTAAAGATC GCATGCTTGA GGTTATGTCA AATGCTGGTC AAGCAATTAA GAAAGGCGAA GAAATGACGA TAAATTACAT GCCAGGCCAG AAAAACAACA TGCTTATGGA AAGATACGGC TTCTCAACTC CTGTGAATCC GTGGGATGCT ATAAAGTTCT CTGGAGCTTC TCGCATCCAT TTAAATTCCT TTTTATCGAT CTTCAATATT TTTGGTCTTC CTGAAGAATA TTACCATGAC AGCGAGTTAG CGGGAGGTGA TACTTTTGTT GATGGAGCAG TTATAGCTGC AGCAAGAACA TTGCCCACTT GGTCAGACAT AGATCTTCCT CCAATTCCAA GTGCGGAAAG AAAAGCAGTT AAAGAATTGC AAGATGAATG TCGAAAGATG CTTGCGGAAT ATCCCACAAC AGCAGACCAA GACCAGAAAT TGCTAGATTC AATGTCAGAA GCAAGGACAA CGTTTGCGAC AGCGGTTAAG TATAGAATGC ACAGAAAGAT GTTCATTGGA AAGATCATCA AGGCACTTGA CATCTATCAA GAACGGTTAC TATTTTGATT CAAGCGAAAA ATAATTGAGC TACTTAGAAA CTGCACCATG GAATTGAAAG GTTCCTGTTT TTGTTTAGTG TAAGCTTATG TATTTGTATG GAACAGTTAG ACTAAATGTG TTAGTTTGTT TTAATCGCAA TCACAAACCA ATCATAACTT CTTCTTTTTT GGCTGTTTAA TGGGTTTGAT TAGCCAACAA ACGCTTTGG 
Length1679
Protein Sequence
Protein Residue
Map Locationscaffold_7: 9117494.. 9120488
Download Sequence
A.thaliana
AGI-codeAT4G20130.1
Descriptionplastid transcriptionally active 14
TAIR curator summary
Alias[PTAC14][TAC14][plastid transcriptionally active 14]
Gene coexpression
MR
MR Locus Description
5.47723 Ahg937391 translocon at the outer envelope membrane of chloroplasts 75-III
14.0712 Ahg478824 Tetratricopeptide repeat (TPR)-like superfamily protein
15.2971 Ahg482332 Ribosomal protein S5 family protein
21.4942 Ahg493601 acetyl Co-enzyme a carboxylase biotin carboxylase subunit
23.2379 Ahg490441 Ribosomal L5P family protein
23.5584 Ahg477193 isopropylmalate dehydrogenase 2
24.2899 Ahg328874 embryo defective 1923
29.189 Ahg482190 RmlC-like cupins superfamily protein
32.7414 Ahg484358 ribosomal protein L15
32.9545 Ahg348313 RNA-binding (RRM/RBD/RNP motifs) family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression