Detail



ID : Ahg493412

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493412|fgenesh2_kg.7__2845__AT4G14820.1
Sequence
ATGACTCTTC CGCCGCCGAG ACCTTCATTC GCCGTCTCCG CCGCAAATAC AATTCTAGAG AAACTCTCAT TCTGCAAATC ACTCAACCAC ATCAAGCAAC TCCATGCTCA CATCCTTCGT ACAGTGATCA ACCACAAACT CAACTCCTTT CTCTTTAATC TCTCCTTCTC TTCTTCCTCT ATCAATCTCA GCTACGCTCT CAATCTCTTC TCATCTATTA GCCCTCTACC GGAATCCATT GTCTTCAATT CTCTTCTCCG GGATCTCTCT CGTTCCGGTG AACCTAAAGC AACGATTCTG TTCTATCAGA GGATTAGACA TGTTGGTGGT CGTTTTGATC GAATCAGTTT CCCTCCGATT CTTAAAGCGG CTTCGAAAGT CTCGGCCTTG TTCGAGGGTA TGGAGCTTCA CGGCTTTGCG TTCAAGATTG CGACTTTGTC TGACCCTTTT GTTGAGACTG GTCTTATGGA TATGTATGCG GCTTGTGGTA GAATTAATTA CGCACGCAAT GTGTTCGACG AAATGTCTCA AAGAGATGTT GTTACGTGGA ATACTATGAT TGAGAGGTAT TGCCGATTCG GTCTTTTAGA TGAAGCATTT AAGCTTTTTG AGGAGATGAA GGATTCTAAT GTGATGCCAG ATGAGATGAT TCTCTGTAAC ATTGTCTCGG CATGTGGTCG TACTGGAAAT ATGAGATATA ACAGAGTGAT TTACGATTTT TTGGTAGAGA ATGATGTTAG GATGGATACT CATTTGTTGA CTGCTCTTGT TACTATGTAT GCTGGAGCTG GTTGTATGGA TATGGCAATG GAGTTTTTTA GGAAGATGTC AGTGAGAAAT TTGTTTGTTT CGACTGCCAT GGTTTCTGGG TATTCAAAAG CTGGGAGACT CGACGATGCT CGGGTTATAT TTGACCAAAC GGAAAGGAAA GATTTGGTTT GTTGGACCAC AATGATTTCG GCTTATGCTG AAAGTGATCA TCCTCAAGAA GCTTTGAGAG TTTTTGAGGA AATGTGTTGC TCTGGGATCA AACCTGATGT GGTTACCATG TTGAGTGTTA TATCAGCTTG TGTGAACCTT GGTACTCTGG ATAAAGCGAA ATGGGTTCAC CGTTACACTC ATCTTAACGG GTTGGAGTCA GTGTTGCCAA TAGATAATGC CCTCATTAAC ATGTATGCGA AATGTGGAGG TTTAGATGCA GCAAGAGACG TGTTTGAGAA GATGCCAAAG AGGAATGTAG TATCGTGGAG CTCTATGATC AATGCCTTTT CTATGCATGG GGAAGCCAGT GATGCGCTTA GCTTATTCGC CCAAATGAAA CAGGAAAATG TCGAGCCCAA TGAAGTTACT TTTGTGGGAG TGCTCTATGG TTGTAGCCAC TCAGGACTAG TTGAAGAAGG TAAAAAGATC TTTGCATCAA TGACTGATGA ATACAACATT ACTCCAAAAA TTGAGCATTA TGGATGCATG GTGGATCTCT TTGGCCGAGC TAATCTCTTA CGAGAAGCTC TTGAGGTTAT AGAATCAATG CCAATGGCGC CTAATGTAGT CATATGGGGA TCACTGATGT CAGCTTGTAG GGTCCACGGT GAGCTTGAGT TAGGCGAATT AGCAGCCAAA CGTATCCTCA AACTGGAGCC TGATCATGAC GGGGCTCTTG TGTTGATGTC CAATATATAT GCTAGAGAAC ATAGATGGGA CTACGTAAGG ATCATAAGAT GGATAATGGA GAAAAAGAAG GTGTTCAAGG AGAAAGGTCT TAGCCGGATT GACCAAAACG GGATATCGCA CGAGTTTCTC ATTGGTGACA AGAGGCATAA GCAATCAAAT GAGATTTATA CGAAGCTATA CGAGGTTGTA AGTAAACTGA AGCTAGCCGG TTACGTTCCA GATGGTGGTA GCGTTTTGGT GGATGTAGAG GAGGAAGAAA AGAAGGATTT GGTTCTATGG CATAGCGAAA AGCTTGCGCT CTGCTTCGGT CTGATGAATA AGGAAAAAGA AGAAGAGAAA GGCTCGTGCG GTGTTATTAG AATAGTGAAG AATCTAAGGG TGTGTGAGGA TTGTCACACG TTCTTCAAGC TGGTCTCTAA AGTGTATGAA CTGGAGATCA TAGTGAGAGA TCGAACTAGG TTTCACCGTT ATAAAGACGG TCTGTGTTCT TGCAGAGATT ACTGGTGA 
Length2178
Protein Sequence
Protein Residue
Map Locationscaffold_7: 12669332.. 12671584
Download Sequence
A.thaliana
AGI-codeAT4G14820.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
16.0624 Ahg479811 Tetratricopeptide repeat (TPR)-like superfamily protein
33.4664 Ahg904675 TAS3/TASIR-ARF (TRANS-ACTING SIRNA3); other RNA
40.5463 Ahg358337 rRNA processing protein-related
50.1398 Ahg324546 homeodomain GLABROUS 1
60.9918 Ahg890272
64.3195 Ahg475515 Membrane insertion protein, OxaA/YidC with tetratricopeptide repeat domain
66.0681 Ahg475818 Proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
74.162 Ahg472914
94.1382 Ahg484310
97.8162 Ahg326105 DNA repair protein Rad4 family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression