| Annotation |
|---|
| Description | jgi|Araly1|493488|fgenesh2_kg.7__2921__AT4G14220.1 |
| Sequence |
ATCTTCTTCT TCTTCTTCCT CTTCTTCTTC AACCTCTTAA ATCTCAAATT CTCTCAATCC TCAGCTTCTT CTTCTTCTTC TTCTTCTTCT TCCATCTTCG CTTCAACAAC AATGTCTAAT TTCACTTATA CTTCTGCCTT CAACTTATCC GACTCCCCTT TTGATTCCGC CATTGCTTCT TCTTCCTCCG CCTTCGTCGT ACCTTCCGAT GATGATTCCG ACGACGCTTG TAGCATCTGT CTCGAGCCTT TCACTCTCCA GGATCCTTCC ACTGTCACCA GTTGCAAACA TGAATATCAT CTTCAGTGCA TCATTGAATG GTCACAGAGA AGCAAAGAGT GTCCTATTTG CTGGCAATTG TTTGTTTTGA GAGATCCTGC TAGCCAAGAG CTTTTGTCTG CTGTGGAAAA GGAAAGACTT TTGAAAACCA GGAACATTTC TTCATCATCT CCAATATCTA TTCATCACTC TCAGGAGGAT TTTCACTCTG AGGAGGAGGA ATCGCAGTTT AGCAGCTTTG ATGAACAGTT CTTGAGGCAT CTCACTGAAG CTGCCCATAG ACGTTGTTTG CTTCGTAGAA GGGATGGTCA AATATCCTCA AGTCTTGTTT CGTCCAGTGA TCCCACTATG ATTCATCCTA CTGATTTGGT CAATCTTTAT CGTATCTCTG CTATTTCCCA TGTTGAACAT CAAAACGCAA ACCCTTGTCC AAGTCCTGGC TCAATGACCG CATCTCCTGT CTCTGGCCAC TCTTCCGTTC CTGCAGATAG CAACAACGCA TCCAGAATCT CTCCTGGCCC GTCTCCGTCT CGTTCATCTC AAAGTCCAGA TCCACCTGAA GCATCCTCTC TTCCTGAAGC CATTAAATCC AAACTAGCTG CTGCTTCCGC AAAGTACAAA GAATCGATCT CTAAAAGTAA ACAAGGTCTT AAAGAGAAGC TACTTGCTCG CAATAACTCA GTGAAAGAAT TGAGCAAAGG AGTACAACGT GAAATGAATG CAGGAATAGC TGGTGTTGCA CGCATGATCG AACGCTTGGA TTTTTCTTCA AAACGTTTTG GAGGGTCTGG TCATGTATCA ACCTCCACTG CTACTGCTTC TGGATTCAAT TTCTCATTCA AAGGGAAGCG TGTAGAAGCC AATTCTAAGT CTAGCAACAA TGGAGACAAA ACCGAACCCC AAAAGCTGCA GGGAGGAGAA ACTTGCTGAG GCAATCAGAT AAATGGAGAG AGGCCTTTAA TGCAAGCGAT GTACGTTTCC ATTGAATCAA CTTACCCGTT GGTCTTCGCA TCCTGCATTG TTCCAGAGCT CACGGTCTTG TCTCTCTTCT CTCTGTTACT TTTGCGATGA GTACTTTTAG AAGGCTAAAA TAAGCAACTG AGTAATCTTT TTATTACTCG ATTTTCGCGG AGTCAAAACT ATAATATTTA TTAATTTCAA AGGATAATGT TCTATGTTTT TTCACTAAGA ATTGGATTAG TCC |
| Length | 1483 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 13353266.. 13355786 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G14220.1 |
| Description | RING-H2 group F1A |
| TAIR curator summary | encodes a RING-type E3 ubiquitin ligase implicated in gametogenesis. RHF1a can interact with the cell cycle inhibitor ICK4/KRP6 in vitro. It apppears to target ICK4KRP6 for degradation following meiosis in order to allow the mitoses associated with megagametogenesis and microgametogenesis to occur. RHF1a is expressed in the carpels throughout floral development. It is expressed in various tissues of the anthers during the early stages of anther development but not in stage 12 flowers and beyond. |
| Alias | [RHF1A][RING-H2 group F1A] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 17.2047 |
Ahg349525 | NAD(P)-binding Rossmann-fold superfamily protein |
| 20.4939 |
Ahg490282 | F-box/RNI-like superfamily protein |
| 23.2379 |
Ahg941553 | |
| 27.313 |
Ahg359345 | |
| 28.1603 |
Ahg345212 | fatty acid hydroxylase 1 |
| 36.9053 |
Ahg487826 | |
| 50.3686 |
Ahg472463 | Trm112p-like protein |
| 51.0588 |
Ahg478555 | Protein of unknown function DUF106, transmembrane |
| 55.3895 |
Ahg479874 | Ribosomal RNA processing Brix domain protein |
| 57.8273 |
Ahg948747 | Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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