Detail



ID : Ahg493802

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493802|fgenesh2_kg.7__3235__AT5G41820.1
Sequence
ATGCACGGTC GTGAGAGGAA CGAGGCTTCG AAGCCAGAAG AGACCGCTGC TAAAGCCCTT GAGCTCCGGT CACTCCAGTC CCAGTTCATG TCCAATCACC ATCAAAAGAT TTACACACAG GAAGCAATTC AATTAAGCGC AAAGCTTCTA GGTATCAATC CGGAGGCCTA CACGGCTTGG AACTATCGAA AACTCGCCCT CGAGTCCCGA ATCGACGAGG ACTCTGATCC AAGCTTGGTC GACTCTATTA TCGATGAAGA ACTTAGAGTC GTACAAAATG CCTTGAAGCG AAACCCTAAG TCCTATGGAG CTTGGTATCA TCGAAAGTGG GTTTTGAGTA AAAAAGGACA TTATTATTCC TCCTTAGAAA AAGAGTTGCA ACTTTTGAAT GACTATCAAA AGCAATGCCT TGTGAATGAC TATCAAAAGC AAGACGATCC AAAAAAGCAA GACAATGCCA GGAACTTTCA CGCTTGGAAC TATCGCAGGT TTGTTGTGGA GCTAACCGAG ACGTCAGAAG AGGATGAGTT GCAGTATACA AATATGATCA ATGATATTTG TTTCAGCATC TATTCTGCGT GGCACTATCG TAGTGTTCTA GTTTCAAGTT TAGTGGCAAA AAATGCTGAT GGGTTTATGC CAAAGGAAAC GATTCGTCGT GAACTTGATT ATGTACATAA TGCTATTTTT ACGGACGAAC TTGGCCAAAG TGGATGGTTT TATTACCTTT GGCTTCTTGA TCAAACTCTT AAAATGGAGA CTCCTCTTCG CTTTTCCTCA TGGCCATCAG ATGGTTCCAT TATCACTACT TTCTGTTCCG AGTCTGGTTC TTTTCCACTG ATTCTTTACT TTGACCAAGC CGTCAGTGGA GTTAGCTCGT CTACTGTTAC TATTGATTCT GAACTCAAAG CCAATGAGGA TCTTGTTTGG GAACCAGTTT CGGATAATAA GAACTCTCAA GTGGACTCTT GTGTATGGGT TGCTCATCTG AAATTTGACA GTAGAGGACC TTGCTTTAGT CGCAAGGAAA ACAAAGTCAA GGTCAGCCTT GGAGGAATTG TTTCTTCCAT GGGATGTAAC TTGAGCACTC CTTATGAGTT TGTATTTACA GTACTGCACA CTGTTGGAGA GTCGTCACAA CAAGGCATTG TTTCATGGAC GGATGGTTTT AACAATTGGG ATGATGCACA GTCGAAGGAT TTGAATTCTT TTATCGCCTT AAACGCTGAT GCGGGTTTTG AGTGGCGTAA GGAAGCTATA AAGATAGAGA TTGATCATCT TCGTAATTTG CCTGACAGCA AATTTGGAAA GCTCATTCTT GCAAGGCTTT TGATGGCTGA GGAAACTATG ATCTCGGATG ATGCTGTTAA AGGTTTCCAT TATACAGAAA TCCTCCAGCT CTATAACGAT CTCATTGCCC TTGATTCCTG GCATGCCCAG TACTACAAGG ATGAGCACAG TGTAGCTCTT CTCCACAAGG TGACTTCAAG CACTGAATCC ATGTTCAGAC ACCTCTTTCG GTACAGGAAT ATGAACAATA TTGTATGTCT TAGGCTCAAT AACTTAACAC TATCTCGGAT AGCCGCGGTT GAGAAGTTGC TATTTGTTCA AATGTTAGAT CTCAGCAACA ATGAGCTTCA TTCAGCTGAA GGATTGGAGG CGATGCAGCT TCTCTGTTGT CTAAATCTGA GTCACAACAG AATCAGGAGC TTTTCAGCAC TTGACTCTCT AAGACATCTG AAGCAGCTTA GAGTGTTGGA TGTTTCACAT AACCTCATCG GCGGGGAGCA CCCAGTGGAC ACAACAAGGT ACCTTTGTTC TTCGCCGCTC TCTAATTCGG GTGAAATTGG AAGAGAGGTG CCTTGTAAAT ACTGGGATGC GTATTTGGTG CTTAGAGATT TGATGAAACT GAAGCAGTTA GATATTAGAG GCAACGACCT AATATTTTCA GGGGAAGAGT TCAGCTCTTT TGTCCGCCAG GTTGTGCCAA AGCTTGTATG GCTTGATGGC CACAAACTCA CAAATTAA 
Length2028
Protein Sequence
Protein Residue
Map Locationscaffold_3: 3576489.. 3579253
Download Sequence
A.thaliana
AGI-codeAT5G41820.1
DescriptionRAB geranylgeranyl transferase alpha subunit 2
TAIR curator summary
Alias[ATRGTA2][RGTA2][RAB geranylgeranyl transferase alpha subunit 2]
Gene coexpression
MR
MR Locus Description
51.7301 Ahg332687 transposable element gene
74.1822 Ahg906489
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression