Detail



ID : Ahg493816

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493816|fgenesh2_kg.7__3249__AT5G41700.4
Sequence
ATCTGCAGGA GTGAATCACA GAACCGAATT TGGAGGATTC TTTCTGAGGG ATTTTTCAGT GAGAAAATGG CGTCGAAACG GATCTTGAAG GAGCTGAAGG ATCTCCAGAA AGACCCTCCA ACCTCCTGCA TTTTTGTAGG TCCAGTTGCT GAAGACATGT TTCATTGGCA AGCTACAATA ATGGGTCCTG CAGAGAGTCC GTATTCAGGC GGTGTGTTTC TCGTTACCAT TCACTTCCCT CCTGACTACC CATTCAAACC TCCAAAGGTT GCATTTAGGA CGAAGGTGTT TCACCCTAAT ATCAACAGCA ACGGAAGCAT TTGCCTTGAC ATTTTGAAAG AACAATGGAG CCCCGCTCTC ACCATTTCCA AGGTGTTGCT CTCGATATGT TCGCTGTTAA CAGATCCAAA TCCAGATGAC CCGTTGGTGC CAGAGATTGC ACACATGTAC AAAACCGACA GAGCCAAGTA CGAGGCCACT GCAAGAAACT GGACTCAGAA GTATGCCATG GGCTAAACAA AGATTCGTAT GCTTCAGCAC CTGTTTATGC TCTCATATCT GTTTGTTTCT TCTTCCTGTT TTAACTTTAA TAAATATGTC TAAAATATCT ACTTTTTTCA TCTATACGAT ATGTTTATGG GTTTTATTAT CAGCATCTTT ATCTGAAATT TGAAG 
Length675
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20122908.. 20124553
Download Sequence
A.thaliana
AGI-codeAT5G41700.4
Descriptionubiquitin conjugating enzyme 8
TAIR curator summaryOne of the polypeptides that constitute the ubiquitin-conjugating enzyme E2
Alias[ATUBC8][UBC8][ARABIDOPSIS THALIANA UBIQUITIN CONJUGATING ENZYME 8][ubiquitin conjugating enzyme 8]
Gene coexpression
MR
MR Locus Description
2 Ahg476066 homologue of bacterial MinE 1
6 Ahg482716 Thioredoxin superfamily protein
8.3666 Ahg481114 K-box region and MADS-box transcription factor family protein
10.9545 Ahg931988 rRNA
11.8743 Ahg476506 protein tyrosine kinase family protein
19.2873 Ahg480488 CCCH-type zinc finger family protein
20.7123 Ahg331396 Protein of unknown function (DUF1682)
21.3542 Ahg315903 STT7 homolog STN7
22.1359 Ahg475455 shaggy-like kinase 42
22.2935 Ahg491400 gamma vacuolar processing enzyme
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression