| Annotation |
|---|
| Description | jgi|Araly1|493859|fgenesh2_kg.7__3292__AT5G41150.1 |
| Sequence |
GAACTTTGAA CGTTTTTTCA GTTTCTCCGA TTTGCGCCGT GTTCTTCAAT GGCGCTAAAA TTTCACCAAC AGATCATATC AGACCTTCTC GAGGACTCTA ATGGCGGATT AGTAATCCTC TCCTCCGGTC TCTCCCTCGC TAAATTAATC GCTTCTCTCC TCATCCTTCA CTCTCCCTCT CAAGGAACTC TACTTCTCCT CCTCTCCCCC GCCGCTCAAT CTCTCAAATC CAGAATCATC CATTGCATCT CCTCTCTTGA TTCTCCTACT CCGACGGAGA TCACCGCAGA TCTTCCGGCC AATCAGCGTT ACTCGCTTTA CACCTCCGGT TCTCCTTTCT TCATCACGCC GCGGATTCTC ATCGTCGATT TATTGACTCA ACGGATTCCA GTTTCTTCAC TCGCCGGAAT CTTCATTCTC AATGCTCATT CACTTTCCGA AACCTCCACT GAAGCATTCA TTGTGCGAAT CGTCAAATCC CTAAATGGCT CCGCTTATAT ACGCGCCTTT TCCGATAGAC CGCAAGCTAT GGTCTCCGGT TTCGCCAAGA CTGAACGCAC CATGCGTGCT CTCTTCCTCC GTAGGCTCCA TCTTTGGCCA AGGTTTCAGT TGGATGTGTC TCAGGAATTG GAGCGAGAAC CACCTGAGGT TGTGGATATT AGGGTTTCGA TGTCGAATTA CATGGTGGGG ATACAGAAAG CCATAATTGA AGTTATGGAC GCTTGTCTCA AGGAGATGAA GAAGACCAAC AAGGTTGATG TTGATGATTT GACTGTAGAG AGTGGTTTGT TTAAGTCCTT TGATGAGATT GTGCGGAGGC AGCTTGACCC TATTTGGCAT ACTTTAGGGA AGAGAACCAA ACAGCTTGTT TCTGATTTGA AGACTTTAAG GAAGCTGCTT GACTATCTTG TTAGGTATGA TGCTGTGAGT TTTCTCAAGT TCTTGGATAC ACTAAGGGTA TCAGAGAGCT ATCGGTCTGT TTGGTTATTT GCAGAGTCCA GTTATAAAAT ATTTGATTTT GCAAAGAAAC GAGTGTATCG TCTCGTGAAG GCAAGTGATG TCAAGTCAAA GGAACTTGTT AAGAATAAGA GTGGTAAAAA GAGAAAGTCG AAGGGCGAAA ATGACTCTGT AGAAGCAGTT GGTGGGGAAA CGGCAACAAA TGTGGCTACT GGCGTTGTTG TTGAAGAAGT TCTTGAAGAG GCGCCAAAAT GGAAAGTCTT ACGTGAGATT TTAGAAGAGA CACAAGAAGA AAGAAAAAAG CAGGCTTTTT CTGAGGAAGA CAACAGTGAC AACAATGGAA TAGTTCTTGT GGCTTGCAAA GATGAGCGGT CCTGCATGCA GCTTGAAGAT TGCATCACAA ACAATCCACA GAAGGTAATG CGGGAAGAAT GGGAAATGTA CCTGCTGAGC AAAATCGAAC TCCGCAGTAT GCAGACACCG CAAAAGAAGA AACAAAAAAC TCCCAAGGGT TTTGGGATTC TTGATGGAGT TGTTCCGGTA ACTACAATAC AGAACTCGGA AGGTAGCAGT GTTGGTAGAC AAGAGCATGA GGCTCTTATG GCTGCTGCGT CTTCTATTCG CAAGCTAGGA AAGACAACGG ATATGGCTCT TGGAAATAAC AACCCAGAGC CTCATGTTGA AAAGGCTTCA TGTACCAAAG GAAAAGCTAA AAAGGATTCA ACAAGTCTCC GGAGATCCAT AAGAAGTTGC AATAAGAAAA AGGAAAACAG TAAACCTGAA ATCTTAACAG GCCCAGAGAA TGAAGAAAAA GCCAGTGAAG CTAGCACATC AGGCCCCCGG GAAGCTAATG TTGTTCACCC CAGTAGTGCT AAAAAGCTAC CGCCTGTGCA TTTTTATGCC TTAGAAAGTG ATCAACCTAT ACTAGATATC TTGAAACCCT CTGTGATCAT TGTCTACCAT CCTGACATGG GTTTTGTTAG AGAAATTGAG GTGTACAAAG CAGAGAACCC TCTGAGAAAG CTGAAAGTTT ATTTTCTTTT CTATGATGAG TCCACAGAAG TGCAGAAGTT TGAAGCAAGC ATACGTCGAG AAAATGAAGC GTTTGAATCA TTGATCAGGC AGAAGTCTTC GATGATAATT CCCGTTGATC AGGATGGGCT CGGCATGGGG TCGAATTCTT CTACAGAGTT TCCAGCTTCA AGTACTCAAA ACTCATTAAC CCGAAAAGCA GGCGGAAGAA AGGAAATGGA GAAAGAGACA CAGGTTATAG TTGACATGAG GGAGTTCATG AGCAGCCTAC CAAATGTTCT TCACCAGAAA GGCATGAAGA TAATACCAGT TACACTAGAG GTCGGCGACT ATATCCTATC TCCTTCAATA TGCGTGGAGA GAAAGAGCAT TCAAGATCTT TTCCAGAGCT TCACATCAGG TCGTTTATTT CACCAAGTCG AAATGATGTC CCGTTATTAC AGAATACCCG TTCTTCTCAT CGAGTTCTCT CAAGACAAAA GCTTCTCCTT TCAGTCTGCG AGTGATATAT CAGATGATGT GACTCCATAT AACATCATAT CAAAACTATC ATTGCTAGTT CTGCATTTTC CTCGGTTAAG GATATTATGG TCTCGAAGTT TACATGCAAC CGCAGAAATC TTCACTACCT TAAAATCCAA CCAAGACGAG CCCGACGAGA CCCGAGCAGT GAGAGTTGGT GTGCCTTCAG AAGAAGGTAT CATAGAAAAT GACATCAGAG CCGAGAACTA TAACACATCA GCAGTAGAGT TTCTGAGAAG GCTTCCTGGA GTTTCAGACG CAAACTATAG AACGATAATG GAGAAATGTA AGAGTTTGGC TGAGCTCGCG TCTTTGCCTG TGGAGACATT AGCAGAACTC ATGGGTGGTC ACAAAGTTGC TAAAAGTCTC AGAGAGTTTC TTGACGCTAA GTATCCGACT TTGCTATAAA AAGAGAGGTA ACACTTATTT AATGTAGAAG CTCAATCACA AAGCTGCTTA GTTATTTCTT GTTCATCTGT GACATTTGAT ATAGATTAGA TT |
| Length | 3012 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_7: 20423359.. 20464469 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G41150.1 |
| Description | Restriction endonuclease, type II-like superfamily protein |
| TAIR curator summary | Confers resistance to UV radiation. Homolog of the human xeroderma pigmentosum group F DNA repair and yeast Rad1 proteins |
| Alias | [ATRAD1][RAD1][UVH1][ULTRAVIOLET HYPERSENSITIVE 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg482227 | Protein kinase superfamily protein |
| 3.31662 |
Ahg489200 | Plant protein of unknown function (DUF639) |
| 6.78233 |
Ahg314258 | nodulin MtN21 /EamA-like transporter family protein |
| 10.9545 |
Ahg478805 | Kinase-related protein of unknown function (DUF1296) |
| 11.3578 |
Ahg483634 | Translation elongation factor EFG/EF2 protein |
| 17.4929 |
Ahg474065 | actin 8 |
| 18 |
Ahg476679 | Zinc finger C-x8-C-x5-C-x3-H type family protein |
| 19.5959 |
Ahg918735 | Leucine carboxyl methyltransferase |
| 21.166 |
Ahg951726 | tRNAHis guanylyltransferase |
| 22.0907 |
Ahg940499 | leucine-rich repeat transmembrane protein kinase family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|