Detail



ID : Ahg493939

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|493939|fgenesh2_kg.7__3372__AT5G40480.1
Sequence
GTCACTCTTC ACTCAAAAAA GCTACTCTAC TTCTTCAATT CACTCTCCTT CGTCTGCGTT GATGTAGCAA AACAAAGAGA ACAAAAAAAT GGTCCGTGTC TCGTTCTGCT TCTTCTTTCT CCTTCTCCTG CTATCGGCTG GAGAAATTTC ATCGCAATTA GGTTCTGGTC CACACATTAC CGATGTTAAC ATACTCTTAC CTCCGAAGAT GAAGAACCCA GTTGAGTATC GCCTTCAAGG AAGTGATGGC TGCTTCAAAT GGTCGTGGGA TCATCATGAC ATTCTCTCAG TTACACCTGA GTTTAATTCG AGCAGTCATT GCTCGACCAG CGCGCGTCTC AGATCGATTT CTCCGTATAG TGGTAGAAAA GAGACTGCAG TTTATGCCAC TGATATACAG ACCGGGATGG TGATTCGCTG CAAGGTGTTT ATTGACAACT TCTCACGGAT TCAGATTTTT CATAATTCTA TCAAGCTTGA TCTTGATGGA CTTTGAATGC TTAGAGTCCG CGCTTTTGAT AATGAAGAGA ACGAGTTCTC CTCACTGGTG GGTCTACAAT TCATGTGGAA GCTGATGCCT GAAAGTGGTG GATCAACGCA TCACCTTGCT CATGTGCCTT TGAAGGAATC TCCGTTGACT GACTGTGGAG GACTGTGTGG CTACTTGGAT ATCCAGAAAA AGCTTGAAGA TAGTGGTGTA TTTGCAGATT TGTTTGTCGT GAAGGGAACC AAAATTGGAC ATGAGAAGGT TTCAGTGCAT CTGCTTGAGG CTCCTCTGAC CCATATAGCC GATGAAATAG TACTAACTGT GGCAGAGGCC ATGTCTCTTG AACCTCGTTC ACCAGTCTAT GTCCTGATGG GAGCTTCTTT TGGTTACACG TTAAAGGTCA TGCGTGGAAA TGTTCCTCAA GCCGTGCATC TACCATCACC ACATCATAGA TGGTCTGTGT TGAACACTTC TGTTGCTCAA GTGGATTCTT TGATAGGTCT GACTAAAGCG TTAAGCTTAG GGGTAACAAC AGTTGTTGTT GAGGACACCC GGGTCGCTGG CCACATTCAA GGATCATCTA TTAATGTTGT CACTCCAGAT ACTATTATCT TGTACATATC ACCTTGGTCA ATGTCAGGGG ATCTTATTAC AGAATCGAAA CCTTTTCCAT CATCGATGCA TTGGTATGTG GTGTCTGGTC GTCAATATCT AATTCAAATG AAGATTTTCT CTGGAAGACC TGATGCACAT GAAATCTATA TAACTGAGAC GGATGACATA AAACTGTATG GAAAAGATTC AGAGTATTGG AAAATCTTCT CACTGCCAGA TGAACTTTCC TCTGAATATG GTCAGCAAAA TTCTAGAATT TTGAACGCAA TGTCACCAGG ATTAGGAGAG CTAATGGCTA CATTGACTTA CTTCAGTGGG CATCAGGAAT CAAAAGAGGT TCTCAAAGTT GTCCAAGAAA TTATGGTTTG TGAGAAAGTG CAGTTCACAT TGAACAGTAA AGATGACACA CCTAAGATTC TACTCCCTTG GACCCCTGCT GTTTATCAGG AGATGGAGCT AACTGTGACA GGAGGTTGTG CAAAAGCATC GAGTGACTAC AAGTGGTTTA CTTCAGATAT GAGCATTTTG TCGGTGTCAG CTTATGGAAT TGTCCAGGCA AAGAGGCCTG GAATAGCCAC TGTGAAGGTG GTGTCTACTT TCGATTCACA AAATTTTGAT GAGGTTATCG TTGAAGTTTC CATTCCATCC TCTATGGTTA TGTTGCAAAA CTTCCCAGTA GAGACAGTTG TTGGATCACA CCTGAAAGCT GCTGTCACAA TGAAGGCTTT AAATGGTGCC TTGTTCTCTA GATGTGATGC ATTTAATTCA TTGATAAAGT GGAAGACAGG GAGTGACTCT TTTGTTATTG TTAATGCAAC ATCTGAGATA ATGATGTTGG ACGAACTAAG AACCATGGAC TCCAGCCCTC CTTGTTCACG GGCTTCTATA TTGACTTCAT CTCCTGGCCG AACAGTACTA CAAGCAACTC TGGCAAAAGA GTTCCATTAT TTTGATAAGT CTTTGAGTGA ATCAATTGAT TTGAAAGCAA CTTTAAGTAT CGGGGCCTAT CTGCCACTTT CTGTCAGACA AGATAGTGAC GGGAATCATC ATGGTGGATA TTGGTTTGAT AAGGCACAGG AAGAAACTGA TTTTGGTGTT AGTAAGCTAT ATCTTGTACC TGGGACATAT GTTGACGTTA TGCTTCTGGG GGGACCTGAA AGGTGGGATG ACAATGTTGA GTTCACCGAG ACTGTGAAGA CATTGAATGA AGATGAGGAG GATCTTACAA GCAGAGTTAA CGTGCATCAT GAGTTTGACC GCCATGCTAA CATGTATAGA ATTTCGTGCC AGAAGCTTGG CTCCTATAAA CTGGTCTTCT TGCGTGGGAA TTTGGTGGGT ATGGACCATC CTGTACCTGC AGTTGCAGAA GCTTTATTGT CTGTTCATTG CAGCTTCCCA TCCTCTGTTG TGCTCATTGT TGATGAACCT GTTAACAAGC TTGATGTGAT TAGAGCTGCT AGTCAAGCTG ACAGGGCACC AGGACGACTT CGTGTAACTC CTGTGACTGT GGCAAATGGG CAGATAATTC GTGTGGCTGC TGTTGGTATT AGCGAGTTTG GAGAAGCTTT TTCAAACTCC TCAACTCTTT CTCTCAGGTG GGAACTGACC AGTTGCAACA ATTTGGCATA CTGGGACGAT AATTATAACT CAAAAATGAC AAAGTCTAGC TGGGAGAGAT TTCTGGCTCT TCGCAACGAA TCAGGATTGT GCACTGTCCG AGCTACCGTT TCTGGTATTG ATTATTCATA CTCAACTCCG CTTCCACAAG GTTCTCAAAG TACTCTCACT GATGCTGTAC GCTTACAGTT GGTTTCCACA CTAAGAGTCA CACCAGAGTT CAACCTGGTC TTTTTCAATC CGAATGCCAA GGTAAATTTG TCAATGACTG GAGGGAGCTG TTTGTGGGAA GCAGTTGTGA ATAATTCTCG TGTAGCAGAA GTTATTCGAC CCCCATCTGG CCTGCAATGC TCGCAAATGA TGCTATCTCC AAAAGGGTTG GGGACTACAC TCGTGACAGT ATACGACATT GGGGTTTCTC CTCCACTTTC TGCTCTTGCG TTGATTAAAG TTGCAGATGT GGACTGGATA AAGATTGCAT CTGGGGATGA GATAAGTATA ATGGAAGGAA GTACACACTC CATTGATCTC TTGACTGGCA TTGACGATGG GATGACCTTT GATTCTTCCC AGTACCCACT TATGGACATT ATGGTGCATA TTGAGGATGA TCTCGTAGAG CATGTCACTG TTGATGATAA TTCACTTTCT GTTGGTGAAC ACGTGGCAAC TTCCTCTTTT AAAATTGCTG CTAGACGACT GGGAATCACA ACCCTATATG TCAGCGCAAG ACAACAATCA GGAGATAAAA TACTTAGCCA AACTATTAAA GTCGAAGTTT ATTCCCCTCC AAGACTTCAC CCACAAGGAA TATTTCTTGT TCCCGGTGCT TCTTATGTGC TCACTATTGA AGGAGGCCCG ACCATGAATG TTTCTGTTGA CTACACCACT GTGGATAACG AAGTTGCAAA GATTGAAAAA TCAGGACGCC TATACGCAAC ATCACCAGGC AACACGACAA TCTATGCAAC GATTTACGGG AGTGAAGGTA CTGTAGTTTG TCAGGCAATT GGCAATGCTG AAGTAGGACT TCCTGCTGCT GCGATGCTGG TAGCTCAAAG TGACACTATG GCCGTTGGTC ATGAAATGCC TATGTCCCCA TCATTTCCTG AGGGAGACCT TTTGTCATTT TATGAGCTCT GCAGCGCATA CAAGTGGACT ATTGAAGATG AGAAGGTGTT AATTTTCCTT GCATCATCCA CTAATGTGGA AGAGAATGCT GGCTTTGTCA ATGTCGTCCA AGGAAGATCA GCTGGCAAAA CCAGAGTCAC AATTGCCTTC TCATGTGATT TCGTGTCTCC TGGCTTGTAC TCTGAATCTA GAACATATGA AGCGTCAATG ATTTTATCTG TTGTGCCTGA TCTCCCTCTT TCGCTTGGCG CTCCTATGAC TTGGGTTCTT CCGCCTTTTT ATACATCATC TGGTCTATTA CCTTCATCTC TAGAGCCACA GAAGCATAGG GATGGCCAAA GTCACAGAGG CAATATAGTC TATTCCATAT TGAAAGACTG TAGCTCTCGG GCTGATTTTG AACGAGATAC CATATCAATA AATGGCGGAA GTGTCAAAAC AACAGATAGC AACAATGTTG CATGTATTCA AGCCAAAGAC CGCACAAGTG GAAGGATTGA GATTGCTGCT TGTGTGAGGG TTGCAGAGGT TGCTCAAATA AGAATGAAGA GTGAGGGGAT CCCTTTCCAC GTGATAGATC TTGCTGTTGG CGGTGAACTT GAACTTCCAA TCAATTACTA TGACACTTTA GGAATCCCTT TTCTCGAAGC ACATGGTGTT ATTACATATA ATGTCGAAAC CAATCATCGT GATGTTGTAT CTATTAAGAC TGTCAATGAC CAACCAAGTG CCTACATTAA GGGAATAAAA CATGGCAAAG CTCTCATTCG GGTTTCCATT GGCGGCAATC TCAGGAAATC AGACTATGTT CTGGTTTCAG TTGGGGCGCA TATCTTTCCT CAAAACCCGG TCATTCACAC TGGAAATGTG TTAAATTTCA GCATAGCAGG GTCTGATCAT GAAGTCTCTG GGCAATGGGT TACATCAAAC AGAAGTGTCC TATCCGTAAA TGTGGCATCT GGCCAAGCTA AAGCGATCAG CCAAGGCTCA ACTCACAGTC ATGGTTTGAA ACTGCAAACA AAAGTCACAG TGCTATTTGG AAACACCATT TACGTCGACT CTCCAAGTGA AACACTGACA AATGTCCACG TCCCTGCAGA AGGATATAAA TTTCCAGTGA AATTCAGGGA GAACAAGTTT GCAGTCTCTG AATATGGAAA CAAGGCCACG TTTAACTGCC AAGTAGACCC TCCGTTTATA GGATACGCAA AGCCATGGAT GGATCTCGTT ACGGGCAACA TTTATTGTCT TTTCTTCCCA TACTCACCAG AGCATCTGGT TCGCTCCATG TCTATAACAA AAGACATGAA ACCTCATGTG TCCTTCTCTG TTAATGCTTC ACTTAAAGAA GCTCGTCATG TTTCGGGATC TGCATCTGCA CTTCTTATTG GAGGGTTTTC TGTAACAGGG CCAAATAAGC TGAATATAAA CCCGGATTCA AACACGACCA TTATTTCAAT AGTGGGGAAC ACCGATGTTC AAATTCACTG CCGCAGCAAA GGTAGGTTAT CGATCAACTT GATCAAAAGG GAAGATTTTG GTATCGCAGG ACTTGCACTA TACAAGGTGA ATGTGTTAAG ATCAGAGCAA TTCACAGATA TAATCCGCAT CACTCTCCCC TCTACTGGCC AAAGTGTAGA AATTGATGTC TCCTATGACA CGGGCGAGTC CCTAGTAGCT TCGTCTAAAG ATGGATACTC TGTTTTGTTC AAGATACTAT GGTGCGTTTT GGTGTTGGCT ATATCAGTGA TCATCTTGAT GAAAGTGATA GATAGACAAG GGCCAATTGG TCCAACAGGA GCTACTAGAA CTGCAACAAA CAATGGAACT GCAGCACCGG GAACACCAGA AAGAAGAAGC GGTGCAGTTA TATACCATGA GGAATCTCCA AGAACACCAT CACCGTTTAT GGAGTATGTG AAGAGAACAG TGGATGAAAC TCCCTATTAC AGAAGAGAAG GAAGAAGAAG GTTTAATCCT CAAAACACAA TGTAG 
Length5845
Protein Sequence
Protein Residue
Map Locationscaffold_7: 20853548.. 20864833
Download Sequence
A.thaliana
AGI-codeAT5G40480.1
Descriptionembryo defective 3012
TAIR curator summary
Alias[EMB3012][embryo defective 3012]
Gene coexpression
MR
MR Locus Description
6.40312 Ahg472110
10.8167 Ahg477335 Ribosomal protein L13 family protein
12.3288 Ahg472206 trigalactosyldiacylglycerol 1
12.49 Ahg485156 L-galactono-1,4-lactone dehydrogenase
14.2829 Ahg474164 Calcineurin-like metallo-phosphoesterase superfamily protein
15.0997 Ahg471639 valyl-tRNA synthetase / valine--tRNA ligase (VALRS)
15.2315 Ahg485806 fructokinase-like 1
15.2643 Ahg485949 ribosomal protein L23AB
15.4919 Ahg470361 prohibitin 2
15.8745 Ahg947562 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression