Detail



ID : Ahg494028

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494028|fgenesh2_kg.7__3461__AT5G39610.1
Sequence
CTTTCCTCTC TCTTAAAAAC CCCAACTTTC TTCTCTCTCT TCAAAAACCC TTTTCTTCAT AAAATTCTTA CAAGAAGATC AAAACTTTTA GAAACCCTAT TAGGATAAAA TGGATTATGA GGCATCAAGA ATCTGCGAAA TGGTTGAAGA TGATGAACAA ATTGATCTAC CACCAGGATT CAGATTTCAC CCTACTGATG AAGAACTCAT AACTCACTAC CTCAAACCAA AAGTTTTCAA CACTTTCTTC TCTGCTACTG CCATTGGTGA AGTTGATCTC AACAAGATCG AGCCTTGGGA CTTACCATGG AAGGCTAAGA TGGGTGAGAA AGAATGGTAT TTCTTTTGTG TAAGAGACCG GAAATACCCA ACCGGTTTGA GGACAAACCG GGCGACAGAA GCCGGTTATT GGAAAGCCAC AGGTAAAGAC AAAGAGATTT TCAAGGGAAA ATCACTTGTG GGTATGAAGA AAACTTTGGT TTTCTATAAA GGAAGAGCTC CTAAAGGAGT TAAAACCAAT TGGGTTATGC ATGAATATCG TTTAGAAGGC AAATATTCTA TCGAAAATCT TCCCCAAACA GCTAAGAACG AATGGGTTAT ATGTCGTGCT TTCCAAAAAC GTGCCGATGG TACAAAGGTT CCAATGTCAA TGCTTGATCC ACACATTAAC CGAATTGAAC CAACCGGTTT ACCTTCGTTG ATGGATTGTT CTCAACGAGA CTCCTTCACC GGTTCGTCGT CTCACGTGAC CTGCTTCTCC GACCAAGAAA CCGAAGACAA GAGACTTGTC CAGGAGTCCA AAGGAGGTTT TGGTTCTCTG TTTTACTCTG ATCCTCTGTT TTTACAAGAC AATTATTCGC TAATGAAGCT GTTGCTTGAC GGTCAAGAAC CTCAATTTCC CGGTAGATCC TTTGACGGTC GTGATCCGTC CGGTTTGGCC GGTACAGAAG AATTGGATTG CGTTTGGAAT TTCTGAGTTG TATAACTTCT GTTGTAGATT TGTAGTCATG TGTTCGTGTG TGTGAATGAA TATTCTTGTT ACATTTTTTG TAAAAAAAAA AGGAGAAAAA AATATGCTAG AAAGTCAATT GCTTTTGTTA TGTAGCATTA GTTTTTTTTA TTTTATTTAA TAGACTTCCA AATTAATTAA A 
Length1151
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21696550.. 21697880
Download Sequence
A.thaliana
AGI-codeAT5G39610.1
DescriptionNAC domain containing protein 6
TAIR curator summaryEncodes a NAC-domain transcription factor. Positively regulates aging-induced cell death and senescence in leaves. This gene is upregulated in response to salt stress in wildtype as well as NTHK1 transgenic lines although in the latter case the induction was drastically reduced. It was also upregulated by ABA, ACC and NAA treatment, although in the latter two cases, the induction occurred relatively late when compared with NaCl or ABA treatments. Note: this protein (AtNAC6) on occasion has also been referred to as AtNAC2, not to be confused with the AtNAC2 found at locus AT3G15510.
Alias[ANAC092][ATNAC2][ATNAC6][NAC2][NAC6][ORE1][Arabidopsis NAC domain containing protein 92][NAC domain containing protein 2][NAC domain containing protein 6][ORESARA 1]
Gene coexpression
MR
MR Locus Description
2 Ahg484673 NAC domain containing protein 3
3.4641 Ahg478845
4 Ahg924948 SNARE-like superfamily protein
4.58258 Ahg483895 myb domain protein 2
4.69042 Ahg932721
6.48074 Ahg928536 PYRIMIDINE 4
8.12404 Ahg353160 Protein of unknown function (DUF607)
8.48528 Ahg894102 nitrilase 4
8.77496 Ahg478996 NAC domain containing protein 3
8.83176 Ahg926758 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression