Detail



ID : Ahg494050

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494050|fgenesh2_kg.7__3483__AT1G17060.1
Sequence
TTTTATCACA TTTCTTTTCT ACAGTATTTT TTTTTTTTTT TCTATTCACG CATATATATA GATATACAGC TGCCTCCAAC ATATATAGTC AACTGATGAA ATTATAAGCA TCATCATTAT AGTTTTGTCT CCTTTTTTTC TTTTCCTTTA CTTTCTAGCT CCTCCCTTCT TCATAGATAG ATCAAGATGA TGGAGATTAA TATAGTAAGA AAAGTGTTCT TGATCGGATT CTTGATCTTG ATTCTGAATT GGGTATGGAG AGCTGTGAAT TGGGTTTGGT TAAGGCCAAA GAGACTAGAG AAATATCTGA AGAAACAAGG ATTTTCTGGG AATTCTTATA GGATTTTGAT GGGAGATATG AGAGAGAGTA ATCAGATGGA TCAAGTTGCT CACTCTCTTC CTCTTCCTCT CGACGCCGAT TTTCTCCCTC GCATGATGCC TTTTCTCCAC CACACTGTTC TAAAACATGG GAAGAAGTGT TTCACATGGT ACGGACCGTA CCCGAACGTG ATAGTAATGG ATCCAGAGAC ACTACGAGAG ATTATGTCAA AACACGAACT CTTTCCGAAA CCAAAGATTG GGTCACATAA TCATGTTTTT CTCAGTGGTC TTCTCAATCA CGAAGGTCCT AAATGGTCCA AGCATCGAAG CATTCTTAAT CCTGCTTTTC GTATCGATAA TTTGAAGAGC ATACTACCAG CATTCAACTC GAGTTGCAAA GAGATGTTAG AAGAATGGGA GAAATTAGCT TCAGCAAAAG GAACAGTGGA ACTTGATTCA TGGACTCACT GTCATGACTT AACCAGAAAC ATGCTTGCTC GTGCTTCTTT TGGTGATTCC TACAAAGATG GTATCAAGAT CTTCGAAATC CAACAAGAGC AGATCGATCT TGGTCTCCTT GCTATTCGAG CCGTCTACAT TCCTGGATCA AAATTTTTGC CAACAAAGTT CAACAGGAGG TTGAGAGAAA CCGAAAGGGA CATGAGGGCT ATGTTTAAAG CTATGATTGA GACTAAAGAG GAGGAGATAA AAAGAGGAAG AGCTGGTCAA AATGTCACTT CTTCATTGTT TGTTTGGACA CTTGTTGCTC TAAGCCAACA TCAAGATTGG CAAAACAAAG CAAGAGACGA GGTTTCTCAG GCCTTCGGTA ACAACGAGCC AGATTTCGAA GGGTTAAGCC ACCTGAAAGT TGTAACAATG ATCCTCCATG AAGTTCTAAG GCTCTATTCA CCAGCTTACT TCACATGTCG GATAACTAAA CAAGAAGTGA AGTTAGAGAG ATTCTCTTTA CCCGAAGGAG TTGTGGTCAC AATACCAATG CTCTTGGTGC ACCATGATCC TGACCTTTGG GGAGACGATG TGAAACAGTT TAAGCCCGAG AGATTCGTTA ATGGCGTGGC GGGTGCAACC AAAGGAAGAC TCTCCTTCTT GCCATTTAGC TCGGGCCCTC GGACTTGTAT CGGTCAAAAC TTTTCCATGT TGCAAGCTAA ACTCTTCTTG GCAATGGTAC TTCAAAGGTT CAGTGTAGAG CTCTCTCCAT CGTATACTCA TGCTCCTTTC CCAGCTGCAA CTACATTTCC ACAACATGGA GCTCATTTGA TCATCCGAAA AGTTTAGGAG GTAGAAGAAG AAGAAAAAAT GTAAAGGTGC TTCCTTTCTT TTTTGTTCAT CAACAAAACA GAACCTTGAA GGTGTCTAGT GGTAAATGCA GTTTGAATCC TGTCAAGAAA TCTTATTTGG GTGTTTTTGT ATATAAGAAA CAGATTCAAA TCTATAAATT TCATAAGATT T 
Length1791
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21848028.. 21851390
Download Sequence
A.thaliana
AGI-codeAT1G17060.1
Descriptioncytochrome p450 72c1
TAIR curator summaryEncodes a protein with similarity to other cytochrome P450's and is a homolog of BAS1. Over expression causes a dwarf phenotype resembling brassinolide resistant mutants. Double mutant analysis of sob7/bas1 loss of function mutants suggests these genes have redundant functions in light responsiveness. SOB7 may function in metabolizing brassinolides. Expressed in leaf, root, stem and silique but expression highest in flower and cauline leaves. Dominant overexpressing plants have dwarf phenotype, short siliques/seeds, rounded dark green leaves and short hypocotyls in light and dark. Loss of function alleles result in plants with long hypocotyls.
Alias[CHI2][CYP72C1][SHK1][SOB7][CHIBI 2][cytochrome p450 72c1][SHRINK 1][SUPPRESSOR OF PHYB-4 7]
Gene coexpression
MR
MR Locus Description
10.4403 Ahg900212
10.8628 Virus1111
16.4317 Virus1156
17.088 Ahg892987
23.7487 Ahg915376 Putative membrane lipoprotein
23.7697 Ahg944519
23.8118 Ahg328884 Low temperature and salt responsive protein family
27.7489 Ahg889891
28.5307 Ahg920720 myb domain protein 52
35.242 Ahg952452 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression