Detail



ID : Ahg494546

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494546|fgenesh2_kg.8__362__AT5G44400.1
Sequence
AATGGGATTT TCAAAACCAC TCCCTCTATT TTCATTTCTT TCGATTTTGG TGCTCTATTT TTCATTCTAC ACCATAACAC CAACTTCTTC ATTAGCCTCC CTACAGGATC AATTTATCAA CTGTGTCCAA AGAAACACAC ATGTTTACTT CCCACTTGAG AAAACATTCT TTGCTCCTAC GAAAAATGTC TCTATGTTCA CCCAAGTTCT TGAATCGACG GCTCAGAATC TCCGGTTCTT GAAACAATCC ATGCCTAAAC CGGGATTCAT ATTCAGCCCG ATTCATGAGT CTCACGTACA AGCTTCCATT ATCTGTTCCA AGAAACTCCG AATGCATCTA CGTGTCAGAA GCGGCGGTCA CGACTACGAA GGCTTGTCTT ATGTCTCTCA AATCGATAAA CCGTTTATAT TGATGGATCT GTCAAAGATG AGACAAGTCA ACATTAATAT TCAAGACAAC AGTGCTTGGG TTCAATCTGG TGCTACAGTT GGTGAACTTT ATTACAGGAT TGCAGAGAAG AGCAAAGTCC ATGGGTTCCC GGCGGGGTTG TGCTCGAGCT TAGGCATAGG AGGGCACATA ACAGGCGGTG CATACGGTTC CATGATGAGA AAATACGGTC TCGGTGCAGA CAATGTTCTA GACGCAAAAA TTGTTGATGC CAATGGTAGA TTACTCGACA GGGCCGCGAT GGGTGAGGAT ACATTTTGGG CGATTAGAGG AGGCGCTGGA GGGAGTTTTG GAATAATTCT AGCATGGAAG ATCAAGCTTG TTCCTGTTCC TCAGACCGTG ACCGTCTTCA CCGTCACCAA AACGTTACAT CAAGACGTTG GCAACAAGAT TATCTCAAAG TGGCAAAGAG TTGCGGACAA GCTTGTTGAA GAGCTATTTA TCAGAGTGCT CTTCAACGTA GCTGGAAACG GTGGGAACAA GACTGTGACA ACATCGTACA ACGCTCTGTT TCTTGGCGGG AAAGGCACAT TGATGAAAGT TATGAAGAAG AGTTTCCCCG AGCTAGGGCT AACACTTAAA GATTGTATCG AAATGAGCTG GCTTGAATCC ATTTCTTACA TTTCTGGATT CCCCAGCCAC ACTCCTACTA GTGTTTTGCT TCAGGGGAAG TCGCCTTTCC CAAAGATCAG CTTCAAAGCC AAATCGGATT TCGTGAAAAC CCCGATTCCC GAATCCGGGC TTCAAGGGAT CTTCAAGAAG CTACTTAAAG AAGATATTCC ATTGATGATA TGGAATCCTT ACGGAGGAAT GATGGCGAAA ATCCCCGAAT CACAAATCCC TTTTCCGCAT AGAAAAGGAG TCCTCTTCAA AGTTCAGTAC GTAACAAGTT GGCTAGACAG CGACAAGAGA CCGAGCAGAC ACATCAACTG GATCAGAGAT CTCTACAATT ACATGACGCC TTATGTCTCA AGTAATCCAC GAGAAGCTTA TGTGAACTAC CGCGATCTAG ACCTCGGAAA GAACACAAAA GACGTGAAAA CATGCATCAA ACAAGCTCAA GTCTGGGGAG CTAACTACTT CAAAAACAAT TTCAACAGAT TGATGAAGAT TAAATCAAAG GTTGATCCAG AGAACTTCTT CAGACACGAG CAGAGCATTC CACCTATGAT GTAACGAAAT AAATTAGAAG AAAATCAGAT AATGGTTCTT CTGTATTTCG GAAATATGTT 
Length1680
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3165332.. 3167111
Download Sequence
A.thaliana
AGI-codeAT5G44400.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11 Ahg474578 Disease resistance-responsive (dirigent-like protein) family protein
12.9615 Ahg489005 Glycosyl hydrolase family protein
14.3875 Ahg481718 Argonaute family protein
24.8193 Ahg949937 NADH-dependent glutamate synthase 1
26.4575 Ahg486176 autoinhibited Ca2+-ATPase 11
28.5307 Ahg470205 NIM1-interacting 1
33.1361 Ahg479351 Eukaryotic aspartyl protease family protein
34.4238 Ahg473059
35.9444 Ahg921284 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein
37.3898 Ahg943550 glycerol-3-phosphate acyltransferase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression