Detail



ID : Ahg494813

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494813|fgenesh2_kg.8__629__AT5G42200.1
Sequence
AAGATGCACT ACACACGCAT CTCACCGGTT TTAGTACCAT CTCCGCCACC AACAACCGCC GTTGAATCTA GCGGCGGTGG GCCGATGATA GCTACCGTTT TCATGGCCCT CCTCCTTCCT TGCGTTGGCA TGTGCATCGT CTTCCTAATA TATCTCTTCC TCTTGTGGTG TTCCACACGT CGTCGTATTG AACGTCTTCG ATTTGCGGAA CCTGTTAAAC CGGTCACCGG TAAAGGCCTT TCGGTGTTAG AGCTCGAGAA AATCCCTAAA CTCACCGGAA AAGAGCTTGC CATAATAGCT AGGTCGACGG AGTGTGCCGT TTGCCTTGAA GATATAGAGA GTGGTCAATC GGGTCGTCTA GTTCCCGGTT GCAACCATGG GTTTCACCGA TTATGTGCTG ACACGTGGCT ATCTAACCAC ACGGTTTGTC CAGTTTGCCG CGCCGAGCTG GCTCCGAACA TTCCTCAATG TAATGAAAAT CAAAGTCCAT GTTAAAAACA GAATCTTTAA AATTATTCTT TCCTTCTTTT TTACTCGTTT TGTGTACTTG TCTTGTTTTT TTGTGTAAGC GTTATAGAGA GAAGTTTCCA GGTATTAGTT GTTTTTTGTT GTACATGAAA TTAATTTTAG AGTAAAGTAA AAAATTTATA GTTTTGCCAT TGTATTTACA ACAATTTTTC T 
Length681
Protein Sequence
Protein Residue
Map Locationscaffold_25: 54528.. 55223
Download Sequence
A.thaliana
AGI-codeAT5G42200.1
DescriptionRING/U-box superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
41.8091 Ahg473046 dormancy-associated protein-like 1
69.0217 Ahg472187 cytochrome P450, family 722, subfamily A, polypeptide 1
81.3634 Ahg894515 indole-3-acetic acid inducible 28
82.4864 Ahg354800 zinc ion binding;transcription regulators
88.8707 Ahg474732
96.5453 Ahg480666
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression