Detail



ID : Ahg494864

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494864|fgenesh2_kg.8__680__AT5G48130.1
Sequence
TCCTCTTGTT TTGTGGATCC TAGAACCCTT TTCTTCCTCT TCAATCCCCA AAACACGCAA CTTTCTTCTT CAAAAATGTA ACAGTGAAGA AGAATAAATG GATGACCAAG TGTCTCTATT TTCATCATTA CCATATTGGT TTTGATATAC TTTATCTACA TAGTTTTCAA AAACCACAAG TTATATACTC AATAATGGAA ACTTGCAGCA TCAAGGATGG TTCGTCCGTC GCCTCCAGCC CGATTTCTTC TCCGAATATT AGTACCCTTT TGAAAATCAA AGTTCTTTCT TGGAGTAAAG AGACCGGTCT ACCTGCGTCA GTACATGTTC GAGTGTGCAA CAGGAGTTTT AACCTTCACA AGACGCTCTT GTGTACAAAG AGCGGATATT TTAAGGAAAG AGAAGATCAG CTATCGGAGA TCGAGATACC ACAAGAGTTT CCTGGTGGAG CAGAGACCTT TGAGAAGATT ATGCTTTTCA TATATGGCTG TCCAACTTTA ATACATCCAT TCAACATCGC TGGGCTTAGA TGTGCAGCTC AATTTCTTGA AATGACAGAA CAACATTCGA CGGGAAACCT CTGCGAAAGA TTTGACCTAT ATCTAAACCA AGTTGTCTTG CAAAACTGGG ATGATACGTT AGTTGTTCTG AAGAAATGTC AGGATCTATT ACCTTGGTCT GAAGATTTAC TAATCGTGAG CCGGTGCATA GAGTCTCTGG CTTTCACGGC TTGTATGGAG ATTCTTGATC CGGAAAGACG AAGAGAAAAG CCGGTAGTCA TGCTTGAAGG TTTGGTGAAT CAACCATGGG AATATACAAC CGTAGAGAAA ATTATAAACC AAGATACTTG GATCAAAGAC CTCACAGATC TTCCATTCGA ATTCTTCAGA CAAGTGATTG GGTCACTTAG AAGACAAGGG ATGAAAGAAA GATATGTAAG TCCATTGATC GTCTTTTATG CCAGCAAATC TGTAATACCT GAAGGTCAAA GTAATACTGA TATTCTGCAA AGAGCTCTTG ATCTGCTTCT TACAAGAGAC AAGGCATATA GGTTTGTTCC AGTCGGGTTT TATTTTGCGT GTCTCGCACA CAATTTGAAG CATGAAACTG TGTTGAAGCT GCAAGATCAG ATTGTATCTC TTCTTCACAT TGCACACACC GAAAACTTTA TATACCCGAA AGCCGGGAAC GGGCAAGTTG CTTTCAGTCA GGAGTTGCTT ACAATGGAAA GCCTGTTTTC AACATATGTA TCAACAGAAT CAGAACGACA TCTTACTTCC TCCCCAAGCA ACATGAGAGT TGGAAAATTG TGGGATGTTT ATCTCTCTCG TTTACCATAT GATCAAGAGA TGAAAACAAC AAGGTTCATT GAGCTGATTG AGACAGTCCC AATGTCATTC AGAGAGAGTC ATGACCAACT CTATCTTGCA GTAAACGCAT TTCTTCAGGT ACATACAACC ATATATCAGG AAGAAAAAGG ATCAATCTGC AGTTACCTAA ACTCCCAAAA ACTATCACAA GCAACGTCCC TCCAACTCGT GAAAAACGAG CAAATGCCAT TACGTTTGGT TGTCCAAGCT CTCTTTATCC AACAGCTCAA CACACACCAA GCTTTCAAAG ACTGTTCTGA CTCATTCAGA TTCACAAACT CTGCAGACTT CTCCGGTAGT GTTGTTCCAA GCTCAAGACC CTTAACATCC CAACAAAGCC CTTGCACTGA TGATGAAACC GGGGCAAGAA ACAGGCCGTT ATGCTTCTTG ATGCAGAAAG ATGCAACATT GGATGAGTAC GAGTCAACGA GCTTTAGAAT CCATAACCTC GAAGAGCAAC TAGTTTCTTT AAAGAAGAGC CTTCAGTCCC ACAACAACCA AAAGAAGCCA ACTTGCCTTG GAAAAAGATC AGCGAGTAGA AACAAGAACA CTTTCGGCCA AGTCAAAACG GCTTGTATTG GCTCTGTAAG CTTTACTTCA CAGAGAAATT ATGCCAATAA GCTGCTCCGG GTACTACGTA GAGTTATCTT GTTTGGAAGT AGAAAAACTA ATAGAAAAAC AGATGAGAGT GAGAGATGAA ACATGTATCA AATGTAAGTA TAA 
Length2093
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10733710.. 10736127
Download Sequence
A.thaliana
AGI-codeAT5G48130.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
7.14143 Ahg318935
8.48528 Ahg887734
18.3303 Ahg496732 Ethylene insensitive 3 family protein
19.4936 Ahg944554
22.1811 Ahg494363
23.6643 Ahg483192
30 Ahg933327
30.9839 Ahg906520 Major facilitator superfamily protein
42.3202 Ahg348900 Domain of unknown function (DUF26)
43.589 Ahg921379
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression