Detail



ID : Ahg494918

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494918|fgenesh2_kg.8__734__AT5G48560.1
Sequence
CCCTTACCAT TTACGTTCTC TTCTTTCTCC TCCGACACAC TCCAAAACTC AGAATCTCTC TGATGTGAAT TTGACTAACT CTTTCGTAAT TTAGGATCTT ACTACAAATC AAAGAATTGA GAGAAAATGG ACAACGAGTT GTTTATGAAC ACAGAGTTTC CACCACCGCC GGAGATGGCG ACGCATTTCG AACCACCACC GTCTTCTTCA TCGGCGATGA TGCTTAACTG GGCTTTAATG GATCCAAATC CACCTCAAGA TTCTTCCTTT ATATGGGAAA AGTCAACGGA ACAACAACAA CAACAAAGCA TCTTTGACTC TGCTTTAAGC TCATTAGTCT CATCACCGAC ACCGTCAAAT TCCAACTTCT CCGGTGGTGG CGGTGATGGT TTTCTTATCA GAGAACTCAT CGGAAAGCTT GGAAACATCG GGAATAACAA TAACAACTCC GGTGAGATCT ACGGAACTCC GATGTCTCGC TCTGCCTCAT GTTACGCAAC TCCGATGAGC TCTCCACCAC CACCGACGAA TACGAATTCT CAGATGATGA TGAACAGAAC GACGCCGTTG ACGGAATTCT CAGCAGATCC GGGTTTTGCG GAGAGAGCTT CAAGATTCTC TTGTTTTGGT AGCCGGAGCT TTAACGGAAG AACCAATACA AATCTTCCGA TAAACAACGG TAATAACATC GTTAACAACT CTGGGAAGCT GACACGTGTC TCAAGCACAC CAGCTCTTAA GGCTCTTGTT TCACCGGAAG TCGCACCCGG CGGCGAATTT CCCCGGAAGA GAAAATCTGT GCCCAAAGGG AAATCCAAAG AAAATCCCAT TTCCACTGCT TCTCCATCTC CTACTTTCTC AAAGACGGCG GAAAAGAAAG AAGAATGGGG TGGAAAAGGA AGTAAAAGTT TAGAAGAAAA AGGAGGAAAA AGGAGAAGAG AAGATGAAGA TGAAGAAGAA GGAGAAGGTG AAGGAAACAA TAACACAAAA CCACCTGAGC CTCCTAAAGA TTACATTCAT GTTCGAGCTC GACGAGGCCA AGCGACCGAT AGTCACAGCC TCGCCGAACG AGTTCGGAGG GAGAAAATTG GTGAAAGGAT GAAGCTTCTT CAAGATCTTG TGCCTGGATG CAATAAGGTT ACTGGAAAAG CACTGATGCT TGATGAAATT ATAAACTATG TACAATCATT GCAAAGACAA GTTGAGTTCT TGTCAATGAA GTTATCATCA GTGAACGACA CCAGGCTGGA TTTTAACGTG GACGCTCTTG TGTCAAAGGA TGTTATGATT CCATCAAGTA ACAACCGATT GCATGAAGAA GGACTCCAAT CAAAGTCTTC AAGTCGTCAT CATCAACAAC AACAACTTAA TATGTATAAT AGTAATAATG CACAATTACT TCCCAATATT TCTTCCAATA ACATGATGCT CCAATCTCCT ATGAACTCTT TGGAAGCCTC TACCTTAGCC AGAAGCTTCA CTCACTTACC AACACTTACC CAATTCACTG ACTCTATTTC TCAGTATCAA ATGTTTAGCG AAGAAGATTT ACAAAGCATA GTAGGAATGG GAGTGGCACT AAACCCCAAC AATGAATCTC AACACATGAA AATTGAGCTT TGATCAACCA TTTTTTCATG GTCTCAAGGA AGAAAAATAA GAAAAAAGGA TTGATGGGTG TACATAAACC ATACCAATAT TTGTGATTTA TTCATATACT CATCTCCATT TATATATAAA TACACACATT TATGGAAGTA ACCTATAATT TTTACTTTTT ATATTTTATA TTATCATCTT CCAATTCATT ATTAGGGTTC AATTGTATTG TTATCCACTT TGGTTTCCTT T 
Length1851
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11212790.. 11215823
Download Sequence
A.thaliana
AGI-codeAT5G48560.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
17.8885 Ahg927355 organic cation/carnitine transporter 2
42.5323 Ahg325175 Polyketide cyclase/dehydrase and lipid transport superfamily protein
78.6257 Ahg887884 glutamate receptor 2.7
86.8792 Ahg471013 nicotianamine synthase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression