Detail



ID : Ahg495005

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495005|fgenesh2_kg.8__821__AT5G49480.1
Sequence
AAAGCTTCCT TCACAATCTC AAAAGCCATT TTCAAATTTC AAAAAACTCA GAGAGATCAA GCGATGTGTC CTTCCGGTAG AATCGCGATT CCGATAACCA CCACCGCGAA TTCAGATTTC CGTCCAGCTT TCGAAATCAT CGACACAGAT CACGACGGTA AAATCAGCAG CGACGATCTC CGTGCATTCT ACGCCGGAAT CACTTCCGGT GAAAACAACG ACGAGGCGAT GATCGGAACG ATGATATCAG TAGCGGACGC GAACAAAGAC GGATTCGTTG AGTTCGATGA GTTCGAGAAA GTTCTAGAAA CGGCGCCGTT GTTGTGTAGA TCTGGTAACG GAGGAGACGA TGGATTGATG AAAGATGTGT TTAAGGTGAT GGATAAAGAC GGAGATGGGA GATTGAGTTA CGGAGATCTG AAAAGTTATA TGGATTCGGC TGGTTTAGCT GCTTCCGATG ATGAAATCAA AGCTATGATT CGATTAGCCG GTGGTGATTT AAACGACGGC GTTTCGTTTG ACGGTTTGCT TAAGATTTTT GGGTGTTGAA AAAAAAATTG TTTTTTTTGA CACCGCACAT TTTCCAACTT TATTTATCTC AGCTTTGTTT GTTTGTTTGT TTGCAGAAGT GTATTTGTGT CCACCCAGAT TTTGTTTTCT CTGTTGTTAT AAAAATGTGA GAAAATTAAT GTTGGAACA 
Length699
Protein Sequence
Protein Residue
Map Locationscaffold_8: 12418519.. 12419227
Download Sequence
A.thaliana
AGI-codeAT5G49480.1
DescriptionCa2+-binding protein 1
TAIR curator summaryAtCP1 encodes a novel Ca2+-binding protein, which shares sequence similarities with calmodulins. The expression of AtCP1 is induced by NaCl.
Alias[ATCP1][CP1][Ca2+-binding protein 1]
Gene coexpression
MR
MR Locus Description
6.55744 Ahg935667 circadian clock associated 1
7.74597 Ahg496705
10.0995 Ahg490840 squalene epoxidase 3
10.3923 Ahg342260 B-box 32
11.4018 Ahg483929 NAD+ transporter 1
12 Ahg472562 sulfate transporter 91
12 Ahg482070 salt tolerance homologue
17.4356 Ahg480568 UDP-Glycosyltransferase superfamily protein
18.5203 Ahg485256 Arabidopsis thaliana protein of unknown function (DUF821)
18.6548 Ahg951020 cycling DOF factor 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression