| Annotation |
|---|
| Description | jgi|Araly1|495025|fgenesh2_kg.8__841__AT5G49660.1 |
| Sequence |
ATCTATCTGA TTCTGATCGT GTACAAAAAA CATGAACCCT TCTTTTGTTT TTATAAGCCT ATCAATAATT TGCAGTCTTT CAACTTGTAA CCTTAGCTTC TTCTTCTTCC TCTCTTTTTT CTCCCAAACA CAAAATTTAT CTCTCTTTTC TTGCAACCTA AGTTAGGTTC TCTAGGTTAC TTTTGATCTT TCTCTGAAAT GCGTCTCAAA ATTTTCCCCT TTCTTGTTCT CTTCTTCTTC TTTTGCTTCA ACAACAACCA ATCATGGGGC TTGATGAGTT CGAACCAACA ACCTCAATTT TTCAAACTTA TGAAGAACTC TCTCTCCGGC TTGTCCTCTT GGAATGTCTC TGACGTTGGT ACTTACTACT GTAGCTTCAA CGGCGTAAGA TGCGACGGTC AAGGGCTAGT CACCGATCTT GATCTTTCCG GTTTGTCTCT CTCCGGGATT TTCCCAGAAG GGATTTGCTC TTACTTACCA AACCTTCGTG TTCTTCGTCT CTCTCACAAC CATCTCAACA GAAGCAGCAG CTTCCTCAAC ACCATCCCTA ATTGTTCTCT GCTTCAAGAG CTAAACATGA GCTCTGTATA TCTCAAAGGA ACTCTCCCTG ATTTCCCACC GATGAAATCT TTAAGAGTCA TCGACATGTC TTGGAACCAC TTCACCGGTA GCTTCCCTAT CTCGATTTTC AATCTTAGCG ACTTAGAGTA TCTCAATTTC AATGAGAATC CAGAGCTTGA TCTCTGGACT CTACCAGATT ATGTCTCTAA GCTGACAAAG CTCACACACA TGCTCTTGAT GACTTGTATG CTCCATGGTA ATATCCCGAG ATCCATTGGG AATTTGACTT CTCTTGTTGA TCTTGAACTT AGCGGTAACT TCCTCTCCGG TGAGATTCCA AAAGAAATAG GAAATCTTTC CAACCTGAGG CAGCTTGAGC TTTACTATAA CTATCACTTA ACCGGGAGTA TACCGGAGGA AATTGGTAAT CTCAAGAATC TTACGGATAT CGATATCTCG GTTAGTAGGT TAACAGGAAG CATACCGGAT TCAATCTGTA GTCTTCCAAA ACTCCGAGTC CTTCAGCTCT ACAACAACAG CTTAACAGGT GAGATTCCTA AGTCACTTGG CAACTCAAAA ACCTTGAAGA TCTTGTCTCT CTACGACAAC TACTTAACCG GTGAACTCCC GCCAAATCTT GGATCTTCCT CGCCTATGAT CGCTCTTGAT GTCTCGGAAA ACCGCCTTTC GGGTCCTCTT CCTGCCCATG TTTGCAAATC TGGTAAGCTT TTGTACTTTC TTGTGCTACA AAACCGGTTC ACTGGTTCGA TCCCTGAGAC TTATGGGAGC TGCAAGACCC TCATACGGTT CCGCGTTGCG AGCAACCGCC TCGTGGGATT CATACCACAA GGAGTTATGT CTCTGCCTCA TGTCTCCATC ATCGACTTGG CTTACAACTC CTTGTTCGGT CCAATACCTA ATGCTATCGG TAACGCTTGG AATTTGTCAG AGCTGTTTAT GCAGGGTAAC AGAATCTCCG GTGTTCTACC TCACGAGATC TCTCATGCCA CCAATCTTGT GAAGCTTGAT CTCAGTAACA ACCAACTGTC TGGTCCAATA CCTTCAGAGA TCGGAAGACT TAGGAAACTG AACTTACTTG TACTGCAAGG CAACCACCTC GATTCTTCGA TACCTGAATC ATTTTCTAAT CTCAAATCTC TGAACGTTCT TGATCTGTCC AGTAATCTCC TCACCGGAAG AATCCCTGAA GACCTCTCCG AGTTGCTACC AACCTCGATT AATTTCTCGA GCAACCGGCT CTCTGGTCCC ATCCCCGTCT CATTGATTAG AGGAGGTCTC GTAGAAAGCT TTTCGGATAA CCCTAATCTC TGTGTTCCGC CAACTGCTGG TTCATCGGAT TTGAAGTTTC CGATGTGTCA AGAGCCTCGC GGCAAGAAGA AGCTGAGCTC CATCTGGGCA ATCCTTGTCT CAGTCTTCAT CCTAGTCCTA GGGGGCATCA TGTTTTACTT GAGACAACGG ATGAGTCAAA ACAGAGCAGT GATAGAGCAA GACGAGACCT TAGCGTCTTC TTTCTTCTCC TACGACGTCA AGAGTTTCCA CCGCATAAGT TTCGATCAAA GGGAGATTCT TGAAGCTCTT GTGGACAAGA ACATCGTAGG CCATGGTGGT TCGGGTACGG TCTACAGAGT AGAACTTAAA TCCGGAGAAG TAGTTGCGGT GAAGAAACTA TGGAGCCAAA GCAGCAAAGA CTCAGCTTCT GAAGACAAAA TGCATTTGAA CAAGGAGTTG AAAACCGAAG TTGAGACCCT CGGGAGCATT CGCCATAAGA ACATCGTGAA ACTCTTCAGC TATTTCTCAA GTTTGGATTG TAGTCTTTTG GTGTATGAGT ACATGCCTAA TGGTAACTTA TGGGACGCTC TTCACAAAGG CTTTGTTCAT CTCGAGTGGC GTACACGTCA TCAAATCGCG GTTGGAGTCG CTCAAGGATT GGCTTACCTT CACCATGATC TCTCCCCGCC AATTATTCAT CGCGATATCA AATCGACAAA CATCTTGTTG GATGTAAACT ATCAGCCTAA AGTTGCTGAT TTTGGCATTG CAAAGGTGTT ACAAGCTAGA GGGAAAGATT CAACCACAAC CGTTATGGCT GGCACCTATG GTTACTTGGC CCCAGAATAT GCGTACTCAT CCAAAGCAAC GATCAAATGC GACGTGTACA GTTTCGGGGT TGTGTTAATG GAGCTGATCA CGGGGAAGAA ACCGGTGGAT TCGTGTTTCG GGGAGAACAA AAACATAGTG AACTGGGTGT CAACAAAGAT TGACACAAAA GAAGGATTGA TTGAGACACT AGACAAGAGA TTATCGGAAT CATCGAAAGC GGACATGATC AACGCCTTGC GTGTGGCTAT CCGTTGTACT AGCAGAACTC CAACAATTCG TCCTACTATG AATGAAGTTG TCCAGCTTCT GATTGACGCA ACGCCTCAAG GAGGACCCGA CATGACGTCT AAATCCACAA CAAAGATTAA GGATTCAATA GTGTCAGATC ATCTCACACA AACAAGACTC TAGTCATGCT TTCTTGATGA AGAGGTGTAG CAACAGTTCG TATAACTTCT AAAGATATCA TGTATTTAAA TATATATCAT AGAAGAAACT GCTTATATAT ATAGTCTTTT AATACTTCTA TGTATCTTAA CATCTATATT TTAAAGACTT TGGTTATTTC CGGATTTGCT TCTCCTATTT CAAATCATCA TA |
| Length | 3282 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 12587109.. 12590674 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G49660.1 |
| Description | Leucine-rich repeat transmembrane protein kinase family protein |
| TAIR curator summary | |
| Alias | [XIP1][XYLEM INTERMIXED WITH PHLOEM 1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 5 |
Ahg921319 | T-complex protein 11 |
| 13.784 |
Ahg474913 | |
| 16.1245 |
Ahg480822 | heavy metal atpase 4 |
| 16.1555 |
Ahg490036 | cytochrome P450, family 706, subfamily A, polypeptide 6 |
| 17.8885 |
Ahg938922 | glucan synthase-like 11 |
| 19.7484 |
Ahg472513 | sucrose-proton symporter 2 |
| 21.6333 |
Ahg490418 | GRAM domain family protein |
| 23.0434 |
Ahg929332 | metallothionein 3 |
| 23.1948 |
Ahg491138 | Transducin/WD40 repeat-like superfamily protein |
| 25.4951 |
Ahg492886 | phloem protein 2-A1 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|