| Annotation |
|---|
| Description | jgi|Araly1|495231|fgenesh2_kg.8__1047__AT5G51640.1 |
| Sequence |
AAACTCCCAG ATCTTGTCGA TTTTAATAAA TTCCTCACCA AAGCAAAAGC TTCTTCGTTT TCAATTCTAA ATGTTGTGTG CAGAAAAATC ATGACTTTGG CTTCTCCACG AGTTTCAAAT TCGAAGACTG TGTTGTTGTT TCCTCGGAAA GTTTCTTCAA TTGCATTTGC TATTGGTGGA TTAACTTCTT TCGTCATCTT CGCTTCTCTG CTTCTTTTCA CTTATCCCAT TGGTTCTTCA GTTACTGACT ATCTCTACAG AACAGAGACC ACTCAAAATG TCCAATTTTA CCACAGTATT GATCCTGATT CTAGCTCACA CTCACCACCA TTATTGACAC AAGACAGTGA TCATAAAGTG CTTCCCAAGG ATTCTTCGGA TTCGAACGAT GTTAGATTAG GCGAAGAAAC GAAGTCTTCA AATGTTTCCA TGGATGAAGA AGAAGCTACA CAAGATTCTG TAGAAACAGA ATGTGATCTA TATCATGGTA ACTGGTTTTT TGATCCAATG GGACCGGTGT ACACAAACAA CTCTTGTCCT CTTTTGACAC AGATGCAGAA CTGTCAGGGT AATGGAAGAC CTGACAAGGG GTATGAAAAC TGGAGATGGA AACCGTCTCA GTGTGATCTT CCACGGTTTG ATGCCAAGAA ATTTCTCGAG CTAATGAGAG GCAAGACACT AGCTTTTATA GGTGATTCAG TGGCTCGTAA TCAGATGGAG TCCATGATGT GCCTTCTTTG GCAGGTAGAA ACTCCGGTTA ACCGTGGGAA TCGAAAGATG CAGAGATGGT ATTTCAGGTC ATCATCAGTA ATGATAGCTC GGATGTGGTC ATCTTGGCTC GTTCATCAGT TCAACGAACC GTTTGGTTTT GCTACTGATG GTGTAACCAA ACTCAAGCTC GACCAACCTG ACGAGCGCAT AATTGAAGCT CTTCCGAAAT TCGATGTGGT TGTACTTTCA TCGGGTCACT GGTTTGCAAA ACAGTCTGTC TACATTTTAA ATGACGAGAT TGTTGGAGGC CAGTTATGGT GGCCGGACAA ATCAAAACCA GCAAAGATTA ACAACGTCAA AGCATTTGGG ATCTCTGTAG AAACAATCCT AAAGGCAATG GCTAAACACC CAAACTACAC CGGTCTGACC ATCTTACGTA CTTGGTCGCC TGATCACTAT GAGGGCGGTG CATGGAACAC TGGTGGATCG TGTACTGGCA AAGTAGAGCC GCTTCCTCCC GGGAAGTTAG TTACAAACGG ATTCACAGAG ATAATGCACG AGAAGCAAAC AACAGGGTTT CACCGAGCTG TGGCGGATGA TAAACTCGGC AATAGATCGA AGAAGCTGAA GCTAATGGAT ATCACTGAGG CTTTCGGGTA TCGCCACGAC GGTCATCCTG GCCCGTACAG GAGTCCTGAC CCGAAAAAGA TCACAAAACG TGGACCAGAC GGTCAGCCTC CTCCACAAGA CTGCTTGCAT TGGTGCATGC CGGGGCCGGT AGACACATGG AACGAGATGG TTCTGGAGAT TATAAGAAGA GATTTGGAAG GCAGACGAAG TACACCATCA TCTTGATCTA GGAGCAAAGA GATATATTTA TTTATATATA CGTACAAGAT AATTTATTCA TACCACGGAG TAGTTGATCT AAGGATTTCT AATTTATATT CATACACAAT ACACTCACTT GTAGGTCTCT GTTTTTCTTA CATACAAACT TAAAGCAAAC GTAAGAGTTT TATTTATTAG ATCAGTTACT CTTTTAGATG AATGAATCTT ATAATCATAA TTTTTGTTT |
| Length | 1789 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 13763315.. 13765737 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G51640.1 |
| Description | Plant protein of unknown function (DUF828) |
| TAIR curator summary | Encodes leaf-senescence-related protein. A member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication). |
| Alias | [TBL17][YLS7][TRICHOME BIREFRINGENCE-LIKE 17][YELLOW-LEAF-SPECIFIC GENE 7] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 8.3666 |
Ahg914578 | Eukaryotic translation initiation factor 2B (eIF-2B) family protein |
| 11.4455 |
Ahg336756 | |
| 13.5647 |
Ahg920352 | Mitochondrial substrate carrier family protein |
| 14.4914 |
Ahg337919 | Homeodomain-like superfamily protein |
| 25.632 |
Ahg940356 | DDT domain-containing protein |
| 26.3818 |
Ahg888078 | Protein of unknown function (DUF3414) |
| 37.6032 |
Ahg479576 | Transmembrane proteins 14C |
| 40.9878 |
Ahg485912 | patatin-like protein 6 |
| 48.1041 |
Ahg950590 | smr (Small MutS Related) domain-containing protein |
| 57.1314 |
Ahg921363 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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