Detail



ID : Ahg495283

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495283|fgenesh2_kg.8__1099__AT5G52110.1
Sequence
AGAAATGAGT CTTCGAATTT GTAATTTCCC GTTCCATCCA AAATTCGCTC TACAACCTCG CGCCCAAAGG TCAACACGAA TCTTCGCTCG TACAGAGAAC GATTCTCCAC AACAACAACA ACAACTCAAT CTCTCTGTTC TTCGCTTCAC TTTCGGAATT CCTGGGCTTG ACGAATCTTA TCTGCCGAGA TGGATCGGGT ACGGGTTTGG ATCACTTCTT CTTCTTAACC ACTTCTCAGC ATCTGCTCCA ATCAGTGAAT CTCAAATGAG ATCAGAGGCT TTGGGATTAT CACTTGCTGC GTTTTCAATA GCTTTACCTT ACATTGGTAA ATTCCTTAAG GGCTCTGTAG TGGAGCAGAG AACTCTACCT GAAGAAGGAG AGCAGATTTT TGTGATATCA TCAAATATTG GAGATTCTTT GAAGGAGGAT TTAGCGTGGG CAACGTATGT TTTGTTGAGG AATACAAGTA CTATAGCTGT GTTGATATCG GTTCAAGGTG AGCTTTGTGT TCGCGGGTAC TGGAATTGTC CAGATCAGAT GTCAAAGGCT CAACTACATG ATTGGTTTAC GAAAAAAGTG GATAAGATTG GCTTGGCTGA TGTGAAGGAC ACCCTTTACT TCCCTCAATA TGCAGGTTCT GCACAATCTT GGGATATTCT TCCCGATGGG ACGCGTTCTC TTTTTGTGCA ACCTCTCGTA CAAAATATAA ATGAACCGCA GAAAATGGAT GGGTTTTTGC TGGTGGCTTC TACTGCTGGA TATGCATATA GCGATAAAGA TAGAGCCTGG ATTGGAGCTA TGGCTGAGAA ATTCAGAGGT TAGATTGTTC CCATGGATCA AAGACTTCTT GCTTCCATTT TTTCTCTTTT TGTGGGTTTC AGTTAAGTTG AAACTGTGCA GTCACAACTT TGACAGACTT TCATCGCAGT ATTTATGCTT CGCCACTGTT CCATCTGAAT ATGGGTGGAC TTTGCACATT TTTATAGAAT GTTAATTGGA CCA 
Length1003
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14074054.. 14075517
Download Sequence
A.thaliana
AGI-codeAT5G52110.1
DescriptionProtein of unknown function (DUF2930)
TAIR curator summary
Alias[CCB2][HCF208][COFACTOR ASSEMBLY OF COMPLEX C][HIGH CHLOROPHYLL FLUORESCENCE 208]
Gene coexpression
MR
MR Locus Description
12.1244 Ahg485075 phosphate transporter 4;3
13.2288 Ahg495499 plastid transcriptionally active 15
13.4164 Ahg928125 Metallopeptidase M24 family protein
17.5499 Ahg923615 ARM repeat superfamily protein
21.9773 Ahg944878 CemA-like proton extrusion protein-related
25.04 Ahg487804 Plastid-lipid associated protein PAP / fibrillin family protein
26.1916 Ahg488915
27.3313 Ahg332076 D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein
27.8209 Ahg494946
29.3258 Ahg899894 WPP domain protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression