Detail



ID : Ahg495328

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495328|fgenesh2_kg.8__1144__AT5G52570.1
Sequence
TGCAAAGCTT TACCACACAA TAAAGTTTCA TAAAACCTCA ACGAGCTCCT TCCATGGCAG CAGGACTCTC AACAATCGCC GTAACACTCA AACCACTCAC CCGCCTAAAC CACCCTATCT CCGCCGCAGT TTTCCCTCCA TCTCTCAGAT TCAACGGCTT AAGACGTCGA AAGATCCTCA CCATTTGTTT TGTCGTTGAA GAACGGAAAC AGAGCTCTCC CATGGACGAC AAACCGGAAA GCACGACGAG CTCTTCTGAG ATCTTGATGA CGTCGCGGCT TCTCAAGAAA GCAGAGAAGA AGAAATCAGA GAGATTCACT TATCTAATCG CAGCTGTGAT GTCAAGCTTT GGTGTCACTT CTATGGCTAT CATGGCTGTT TATTATCGAT TTTCTTGGCA AATGAAGGGA GGTGAAGTGC CTTTATCAGA GATGTTTGGT ACATTTGCTC TCTCAGTTGG TGCTGCCGTT GGGATGGAGT TTTGGGCAAG ATGGGCTCAT AGAGCTCTTT GGCACGATTC TTTATGGAAC ATGCATGAGT CTCATCACAA ACCAAGAGAA GGAGCGTTTG AGTTAAACGA TGTGTTCGCT ATAATAAACG CGGTTCCTGC GATTGGTCTA CTCTATTATG GATTCTTTAA TAAAGGACTT GTTCCTGGTC TCTGCTTCGG TGCCGGACTG GGAATAACGG TGTTTGGAAT GGCTTACATG TTTGTCCACG ATGGACTCGT GCACAAGAGA TTCCCTGTCG GTCCCATTGC CAACGTTCCT TACCTCCGAA AGGTCGCGGC CGCTCACCAG CTACACCACA CAGACAAATT CAAGGGTGTA CCATATGGGC TGTTTCTTGG ACCCAAGGAA GTGGAAGAAG TGGGAGGAAA AGAAGAGTTG GAGAAAGAGA TAAGCCGGAG AATCAAATTA TACAACAAGG GTTCTTCTAC CTCCTAATTG CTATATAACC CCAATTTTAC TTCTTTTATA TATGTTTTTG TAATATATTA AAAATGACGT AGAAGAAAGA GTCAGGCTAA 
Length1030
Protein Sequence
Protein Residue
Map Locationscaffold_8: 14299960.. 14301992
Download Sequence
A.thaliana
AGI-codeAT5G52570.1
Descriptionbeta-carotene hydroxylase 2
TAIR curator summaryConverts β-carotene to zeaxanthin via cryptoxanthin.
Alias[B2][BCH2][BETA-OHASE 2][CHY2][BETA CAROTENOID HYDROXYLASE 2][beta-carotene hydroxylase 2]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg476523 B-box type zinc finger protein with CCT domain
7.54983 Ahg493342 UDP-Glycosyltransferase superfamily protein
8.24621 Ahg490840 squalene epoxidase 3
8.544 Ahg475445 Glutamyl-tRNA reductase family protein
10.9545 Ahg484556 photosystem II light harvesting complex gene 2.3
13.5647 Ahg477360 phosphoenolpyruvate (pep)/phosphate translocator 2
14.0712 Ahg950218
14.4914 Ahg924996 Pectin lyase-like superfamily protein
15.5563 Ahg479172 high chlorophyll fluorescent 107
16.3707 Ahg493364 B-box type zinc finger family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression