Detail



ID : Ahg495490

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495490|fgenesh2_kg.8__1306__AT5G54110.1
Sequence
CAAAAGAAAA CGCCATTTTT TGTCGATTCT TCGTCGTCCT TCTTTGAAAT TCACACCAAT TTGTCTCTCT TCCTAGAGAA ACAAAGATTA TTCGAAACTC GTGAAAGTTT CTTCTCCGGT CACCGGAAAA TTGATTATTT CTGATGGCGA CCGGTGATCA AAATCCGAGT GTGGATAAGA AGAAGAAGAA TCTCTTCAGG CTATGTCCGT TTTGGCAGAG GAGAAGAAGC ACTACTTCTT CATCTTCGTC TTCAACACAG AATCCAAGCC AAAACTACCG TAGCCGCCAT GGACATCGGA ATACAGATAT TTCCGCCGTC TCTAAGCCTT CCTTGACTAT GTCTTCCGTT GCGAGATCAC TTCTTCCAGC TCGCCGTCGT CTCCGACTAG ATCCTTCAAG TTATCTGTAT TTCCCTTATG AACCTGGTAA ACAAGTGCGT AGCGCAATCA AGCTTAAGAA TACTAGCAAA TCTCATACTG CATTCAAGTT CCAAACAACG GCACCTAAAA GTTGTTATAT GCGTCCTCCC GGTGGTGTTT TGGCTCCCGG AGAGAGTGTT TTTGCTACTG TTTTCAAGTT TGTGGAACAT CCAGAGAACA ATGAAAAACA GAAGTTGAAC CAGAAGAGCA AGGTTAAGTT TAAGATTATG AGCCTGAAAG TTAAACCAGG AGTAGAGTAT GTGCCTGAGT TGTTTGATGA GCAAAAGGAT CAAGTAGCAG TGGAGCAGGT TCTTCGGGTC ATTTTTATTG ATGCGGACCG CCCGAGTGCT GCATTGGAGA AACTAAAACG TCAATTGGAT GAAGCTGAAG CTGCAGTTGA AGCAAGAAAG AAGCCTCCCC CAGAGACAGG GCCTCGAGTG GTCGGGGAGG GTCTTGTCAT AGACGAATGG AAGGAGAGAA GAGAGAAGTA CCTTGCTCGG CAACAAGTCG AAGCTATAGA TTCTTCGTCC TAAAACGCAG AGAGCAATGT GGATTTGTTA TAAGCTTATA GCTGAGGTGA TGTACATAAT TTATTATCTC TCGATTATCT CTAGACGATT TGTACTTTGT TGTTTTTGTA TGTCTCTGTT TGTTGTGTGA TTCACGCTGG TTTGTTCTCC TTCATCAAAA TTTGTTTCGG TCGTTTGTAG TTGATCTAGA ATGGAACCAA AATTTGTTCA GTATTT 
Length1166
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15257455.. 15259541
Download Sequence
A.thaliana
AGI-codeAT5G54110.1
Descriptionmembrane-associated mannitol-induced
TAIR curator summaryEncodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking.
Alias[ATMAMI][MAMI][membrane-associated mannitol-induced]
Gene coexpression
MR
MR Locus Description
3.74166 Ahg897230 Disease resistance protein (TIR-NBS-LRR class) family
4.69042 Ahg950958 MEI2-like protein 1
6.9282 Ahg482753 HSP20-like chaperones superfamily protein
19.6723 Ahg930155 B-box type zinc finger family protein
21.3542 Ahg928882 UDP-Glycosyltransferase superfamily protein
22.3607 Ahg344762 mitogen-activated protein kinase kinase kinase 14
25.923 Ahg471096 xylem bark cysteine peptidase 3
31.1448 Ahg472196 BEL1-like homeodomain 10
33.1361 Ahg495005 Ca2+-binding protein 1
36.3731 Ahg478281 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression