Annotation |
Description | jgi|Araly1|495490|fgenesh2_kg.8__1306__AT5G54110.1 |
Sequence |
CAAAAGAAAA CGCCATTTTT TGTCGATTCT TCGTCGTCCT TCTTTGAAAT TCACACCAAT TTGTCTCTCT TCCTAGAGAA ACAAAGATTA TTCGAAACTC GTGAAAGTTT CTTCTCCGGT CACCGGAAAA TTGATTATTT CTGATGGCGA CCGGTGATCA AAATCCGAGT GTGGATAAGA AGAAGAAGAA TCTCTTCAGG CTATGTCCGT TTTGGCAGAG GAGAAGAAGC ACTACTTCTT CATCTTCGTC TTCAACACAG AATCCAAGCC AAAACTACCG TAGCCGCCAT GGACATCGGA ATACAGATAT TTCCGCCGTC TCTAAGCCTT CCTTGACTAT GTCTTCCGTT GCGAGATCAC TTCTTCCAGC TCGCCGTCGT CTCCGACTAG ATCCTTCAAG TTATCTGTAT TTCCCTTATG AACCTGGTAA ACAAGTGCGT AGCGCAATCA AGCTTAAGAA TACTAGCAAA TCTCATACTG CATTCAAGTT CCAAACAACG GCACCTAAAA GTTGTTATAT GCGTCCTCCC GGTGGTGTTT TGGCTCCCGG AGAGAGTGTT TTTGCTACTG TTTTCAAGTT TGTGGAACAT CCAGAGAACA ATGAAAAACA GAAGTTGAAC CAGAAGAGCA AGGTTAAGTT TAAGATTATG AGCCTGAAAG TTAAACCAGG AGTAGAGTAT GTGCCTGAGT TGTTTGATGA GCAAAAGGAT CAAGTAGCAG TGGAGCAGGT TCTTCGGGTC ATTTTTATTG ATGCGGACCG CCCGAGTGCT GCATTGGAGA AACTAAAACG TCAATTGGAT GAAGCTGAAG CTGCAGTTGA AGCAAGAAAG AAGCCTCCCC CAGAGACAGG GCCTCGAGTG GTCGGGGAGG GTCTTGTCAT AGACGAATGG AAGGAGAGAA GAGAGAAGTA CCTTGCTCGG CAACAAGTCG AAGCTATAGA TTCTTCGTCC TAAAACGCAG AGAGCAATGT GGATTTGTTA TAAGCTTATA GCTGAGGTGA TGTACATAAT TTATTATCTC TCGATTATCT CTAGACGATT TGTACTTTGT TGTTTTTGTA TGTCTCTGTT TGTTGTGTGA TTCACGCTGG TTTGTTCTCC TTCATCAAAA TTTGTTTCGG TCGTTTGTAG TTGATCTAGA ATGGAACCAA AATTTGTTCA GTATTT |
Length | 1166 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_8: 15257455.. 15259541 |
Download Sequence |
|
A.thaliana |
AGI-code | AT5G54110.1 |
Description | membrane-associated mannitol-induced |
TAIR curator summary | Encodes a highly polar protein with more than 60% hydrophilic amino acid residues that is associated with the plasma membrane. It has limited secondary structure similarity to VAP-33 from Aplysia, which may be involved in membrane trafficking. |
Alias | [ATMAMI][MAMI][membrane-associated mannitol-induced] |
Gene coexpression |
MR |
MR | Locus | Description |
3.74166 |
Ahg897230 | Disease resistance protein (TIR-NBS-LRR class) family |
4.69042 |
Ahg950958 | MEI2-like protein 1 |
6.9282 |
Ahg482753 | HSP20-like chaperones superfamily protein |
19.6723 |
Ahg930155 | B-box type zinc finger family protein |
21.3542 |
Ahg928882 | UDP-Glycosyltransferase superfamily protein |
22.3607 |
Ahg344762 | mitogen-activated protein kinase kinase kinase 14 |
25.923 |
Ahg471096 | xylem bark cysteine peptidase 3 |
31.1448 |
Ahg472196 | BEL1-like homeodomain 10 |
33.1361 |
Ahg495005 | Ca2+-binding protein 1 |
36.3731 |
Ahg478281 | Homeodomain-like superfamily protein |
|
RNA-seq |
Seasonal expression (July 2011 to June 2013) |
|
The four seasons |
|
Growth Chamber expression |
|