Detail



ID : Ahg495787

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495787|fgenesh2_kg.8__1603__AT5G56980.1
Sequence
AAAAATGGAG TTACTAACGA CCGTCGCGAG CTTTTTCACT CCGACGACTC TCTTCCTCCT TCTCAATCTT ATGATCGGCA CAATCGTCGT AACCTCTCGA CTCGGGTCGG GTTCAAGAAA ACATTACCAG CATCACGATG GGTTCGGGTC GGGTCATGCG CCGGCTCCGT TAGCTAGAGC TCCGTCGCTT ATCGACCGAG TCAAGTCCAT CAATTTTCAT CTCTACAAAT TTCCTCATCC TGAAACAGAG CTTTTTTCGA TGACGGCTCA CCATGACGTA ATCGGTTCGG ATCTTCATGT ATACCCGGAT CCGAATCCGG CTCCGTTACA ACGCGCTCCT TCTCTCTTGG ATCGGGTCAA ATCTATCAAC ATGTCTTATT TCAAGTTCCC ACACGACGTA ACCGGGTCGG ATCCTCACTC ACACTCTCAC CTAGATCCAC ACCCGGATCC GACTCCAGCA CAGTTACAAC GTGCTCCTTC TCTTCTGGAT CGGGTCAAAT CCATCGACAT GTCATACTTC AAATTCCAGC AGTATAACCC GGAGGATAAA GACTATGCTA TTCACAAAGA ACCGACCCGT TTCGAAAATA TTCCGACCCG GAAGGGTCGG GTTGACCCGA TTGATATCTC AAAATTCAGG ATCCCGGAGG AAGATCAACC GACTGGAACC GGAATCAATC ATCCAATTGA TCCACCCGGT TTAACTCGGG CTCCGTCTAT CTTAGAACGG GTCAAATCCA TTAAGCTATC ATCCTTTTAC AGATCCGACC CGGAATTGGA TCAAAATCCG GATCCGGTTC TTCACGAAGA GCACAAGCAC GTAAGGAGCA AATCGGAATC GAAAAAACCG GTGAAGAAAA AGAAGAAAGC TTCAACGAAG ATGACGAAAT CAGCGAGCGA GAAATCAGGT TTTGGTTTCA CCGGAAGCCA TGAGGAAGCA GCAGAGACTG TGGAATCCGT CGAACGGAGA AGACCAGATA CAACAAGAGT CGAGAGATCA ACATCGTTCG GCGACGGCGA AGATGGCGTC GACGCAAAAG CTTCAGATTT CATCAACAAA TTCAAACAAC AGTTGAAACT ACAGAGACTC GATTCGATTC TGAGGTACAA GGAGATGCTC AAAGCCAATT GACGCCGTCT CCGTCGCGGT TTTGTTTGCC GCCGTTTTTC ACAGAGGAGA GAGTACAGGA GTAGAGAATG TCTGAATTAC CGATAGTGCC CCTGTATGTT GAGGATATTT AAGTAATTTA TCAATTAGTT AATGTGAATT TATTATTGTT TAGTTCATTA GCGAAGTATG TGTGGCGTTA AAATTGGATC TGGGACGTTG TTTTGCGTCT GAATTATATA TAATGTTACA TTCATTCACT TGGCTATTTT TTCGAGATGT TTAGTACACG TTTCCTAGAT TCTGCCCTAT TTTCAGGTTG TTTTATTTTA TCTTATTAAA CTTTTCTAGA TTTTTATACA TATACAAATA 
Length1480
Protein Sequence
Protein Residue
Map Locationscaffold_52: 53227.. 54802
Download Sequence
A.thaliana
AGI-codeAT5G56980.1
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
34.1467 Ahg477807 RING/U-box superfamily protein
42.0714 Ahg922904 IAA-leucine resistant (ILR)-like gene 6
48.2908 Ahg346360 cytochrome P450, family 704, subfamily A, polypeptide 2
54.909 Ahg496763
56.5243 Ahg481974 BTB/POZ domain-containing protein
59.1439 Ahg476695 cytokinin oxidase 5
59.2959 Ahg350042 glucuronidase 2
69.8212 Ahg328390 Eukaryotic aspartyl protease family protein
76.6942 Ahg495944 Kinase interacting (KIP1-like) family protein
77.4597 Ahg926777 Phosphoribulokinase / Uridine kinase family
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression