Detail



ID : Ahg495839

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495839|fgenesh2_kg.8__1655__AT5G57390.1
Sequence
CCTATTTCCA AAGATGAAGA ACAATAACAA CAAATCTTCT TCTTCTTCTA GCTATGATTC TTCTTTGTCT CCTTCTTCTT CATCTTCCTC CCACCAGAAC TGGCTCTCTT TCTCTCTCTC CAATAACAAC TTCAATTCTT CCTCAAACCC TAATCTCACT TCCTCTACAT CAGATCATCA TCATCCTCAC CCTTCTCATC TCTCTCTCTT TCAAGCTTTC TCCACTTCTC CAGTCGAACG GCAAGATGGG TCACCTGGAG TTTCAACCGG CGATGCCACG GCGGTTCTTT CCATTTACCC CGGCGGTCCT AAACTTGAGA ACTTCCTCGG CGGAGGAGCC ACAACGACGA CAACAAGATC AATGCAACAA GTGCAATCTC TCGGAGGTGT TGTCTTCTCT TCCGACTTAC AGCCACCGCT TCATCCTCCC TCCGCAGCCG AGATCTACGA CTCGGAGCTC AAATCAATAG CCGCTAGCTT CCTCGGAAAC TACTCCGGTG GACACTCGTC AGAAGTCTCT AGCGTTCATA AGCAACAACA GAACCCTCTA GCTGTCTCAG AGGCTTCGCC CACTCCAAAG AAGAACGTAG AGAGTTTTGG ACAACGTACT TCGATTTATA GAGGAGTCAC AAGACATCGA TGGACTGGAA GATACGAAGC TCATCTATGG GATAATAGTT GCCGAAGAGA AGGCCAAAGT AGAAAAGGAA GACAAGGTGG TTATGATAAA GAAGAGAAAG CAGCTAGAGC TTACGACCTT GCAGCTCTTA AGTATTGGGG TCCTACAACT ACGACTAATT TCCCGATATC AAATTACGAG TCTGAACTTG AAGAGATGAA ACACATGACT CGACAAGAGT TCGTTGCTTC TCTAAGACGC AGTGGATTCT CTAGGGGTGC CTCCATGTAC AGAGGTGTCA CTAGACATCA TCAGCATGGT CGATGGCAGG CACGAATTGG AAGAGTTGCC GGCAACAAAG ACCTTTATCT TGGCACATTT AGCACTCAAG AGGAAGCTGC AGAAGCTTAC GATATAGCAG CGATCAAATT CCGCGGTCTA AATGCAGTTA CCAATTTCGA CATCAGTCGA TATGATGTCA AATCTATAGC TAGTTGTAAT CTCCCTGTGG GTGGACTAAT GCCTAAACCG TCTCCAGCAA CCGCAGCAGC TGAGAAAACC GTTGATCTAT CTGCATCCGA CACTCCATCA CCGACGACAC CGTCTCTGAC CTTCAATGTG GCAACAACGG TCCATGACCA TGGAGGAACT TTTTACCACA CTGGAATACC AATCAAACCA GACCCGGCTG ATCATTATTG GTCCAGCATC TTTGGATTCC AGGCAAACCC GAAAGCCGAG ATGCGACCAA TAGCAACCTT TGGGTCGGAT CTTCATAACC CCTCTCCAGG TTATGCTATA ATGCCGGTAA TGCAAGAAGG CGAAAACAAC TTTGGTGGTA GTTTTGTTGG GTCTGAAGTG TATAACAATC ATTCCGCTCA TTCGAGCCCG GTCTCAGCAA CTCCGCTGTC ATCGTCAACG AATGGTAACG AAGGGTATGG TGGAAACATA AACTGGATTA ATAACAACAT TTCAGATTCT TACCAAACTG CAAAGTCTAA TCTCTCTGTT TTGCAGACAC CAGTTTTTGG GTTAGAATGA 
Length1660
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17012077.. 17015104
Download Sequence
A.thaliana
AGI-codeAT5G57390.1
DescriptionAINTEGUMENTA-like 5
TAIR curator summaryEncodes a member of the AP2 family of transcriptional regulators.May be involved in germination and seedling growth. Mutants are resistant to ABA analogs and are resistant to high nitrogen concentrations.essential for the developmental transition between the embryonic and vegetative phases in plants.Overexpression results in the formation of somatic embryos on cotyledons.
Alias[AIL5][CHO1][EMK][PLT5][AINTEGUMENTA-like 5][CHOTTO 1][EMBRYOMAKER][PLETHORA 5]
Gene coexpression
MR
MR Locus Description
7.93725 Ahg477446 Bromodomain transcription factor
11.8322 Ahg352812 calmodulin-related
14.3178 Ahg481585 Thioredoxin superfamily protein
30.3315 Ahg312456 C2H2-like zinc finger protein
34.8999 Ahg493625 IQ-domain 33
38.7298 Ahg949533 Protein of Unknown Function (DUF239)
40.9145 Ahg493181 Protein kinase superfamily protein
50.4381 Ahg489277 Got1/Sft2-like vescicle transport protein family
52.7636 Ahg487639 TCP domain protein 17
53.2071 Ahg491483 Pentatricopeptide repeat (PPR) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression