Detail



ID : Ahg495863

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|495863|fgenesh2_kg.8__1679__AT5G57660.1
Sequence
CATCGAAGCA AATCAAATAC CCAACTCTCA CACGTTCTCA AACCAAAACT TCAAAGAGAG AGAGTTTTTT TTCTGAACTC AAGAAAGAAA AAAAAAAAAG AGTAGTTAAT GGGATTCGGC TTAGAGAGTA TCAAATCAAT CTCCGGCGGG TGGGGCGCGG CGGCGCGTTC CTGTGACGCT TGTAAATCAG TAACCGCCGC CGTGTTCTGT CGACTTGACT CAGCTTTCTT ATGCATATCA TGTGACACAA GAATCCATTC CTTCACTCGC CACGAGCGCG TGTGGGTTTG TGAAGTTTGC GAACAAGCTC CCGCCGCCGT CACTTGCAAA GCCGACGCCG CCGCTCTTTG CGTCACTTGT GATTCCGATA TTCACTCAGC TAATCCACTC GCTAGCCGTC ACGAACGTGT CCCCGTAGAG TCTTTCTTCG ACTCAGCTGA AACCGCCGTC GCCAAAATCT CTCCTTCTTC GAGTTTTGGT ATCCTTGGCT CATCCACCAC CGTGGATTTA ACCGCTGTTC CGGTTATGGG TGATGATCTC GGTTTATGTC CGTGTTCTTC TGAGTTTATG TTTTCTGATT TCGATCGTCT TATTGATTTC GAGTTTCCGA ATTCGTTCAA TCATCCGTCG CATAACAACG CCGGTGGAGA TAGTCTTGTT CCGGTTCAGA CGAAAACAGA GCCTCTTCCG TTAACTAACA ATGATCATTG CTTCGATATA GATTTCTGCA GATCAAAGCT CTCTGCTTTC ACTTACCCTT CTCAATCAGT TAGCCACAGT GTTTCGACTT CGTCTATTGA ATACGGTGTT GTTCCTGACG GAAACACAAA CAACTCTGTT TCTGAAATCT CAGTTCCGTT TAACCGGAGC ACGATCACTA CCTCGACGGC GGCGAGTACT GGTGATCATC AAACGAGCTC CATGGATAGA GAAGCTAGGG TTTTGAGGTA CAGAGAGAAG AGAAAGAACA GGAAATTTGA GAAGACGATT CGTTATGCTT CGAGGAAAGC TTATGCAGAG TCACGGCCAA GGATCAAAGG CCGGTTTGCG AAAAGAACAG AGACAGAAAA CGACGACGTT TTCCTTAGTC ATGTTTATGC TTCAGCCGCC GCACAGTACG GTGTCGTACC AACGTTCTGA ATTCGAATCT ACGGTGGATA AAGAATCAAC TTGAAGACTT CCCATCTTTC ACCGTCGATT TACCGTGGGT GTATAATAAG TATAGTGAGT CTTACCCTAG ACAAACATTA CTTTTTTTAC GCTCTCTCTC ACTGCCACTA TAAAGGCTGT AACTTTTTTT TTTTTTCTTT CTCTTCTATA AATATGTATG CTTATTTTTA TTTAGAAAAT GTTATAAAAT CATATAATTT GGTA 
Length1374
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17127526.. 17129085
Download Sequence
A.thaliana
AGI-codeAT5G57660.1
DescriptionCONSTANS-like 5
TAIR curator summary
Alias[ATCOL5][BBX6][COL5][B-box domain protein 6][CONSTANS-like 5]
Gene coexpression
MR
MR Locus Description
2 Ahg496615 dentin sialophosphoprotein-related
2.82843 Ahg488447 stress-responsive protein (KIN2) / stress-induced protein (KIN2) / cold-responsive protein (COR6.6) / cold-regulated protein (COR6.6)
3.16228 Ahg939212 Fatty acid/sphingolipid desaturase
3.4641 Ahg939656 pseudo-response regulator 7
4.47214 Ahg482070 salt tolerance homologue
5.83095 Ahg481880 phosphate transporter 4;1
6.48074 Ahg483843 pseudo-response regulator 9
6.63325 Ahg350602 high affinity nitrate transporter 2.7
7.34847 Ahg921302 gigantea protein (GI)
7.48331 Ahg928955
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression