| Annotation |
|---|
| Description | jgi|Araly1|495929|fgenesh2_kg.8__1745__AT5G58220.1 |
| Sequence |
AAAAATGGCG ATGGAGATCG GAGAAGACGA ATGGAAGGTT TGCTGTGGAA GCTCCGAATT CGCGAAGCTG ATGGAGATGT CTGGTCCGTT AACTTCAGAA GAAGCAATCT GGACTGCCAG AGACATCTGG TTCAACCTAG TTAATGTGAC AGATTGGCTT GAAGCTTTCT CTGCTCATCC TCAGATTGGG AATACTCCTT CACCTTCTAT CAACTCCGAT TTTGCTCGTC GGAGCGTATC AGAACAGTCA ACGGCCTTTG CCACAACTTC TGCTTCTGCT TTACAGGAGC TTGCCGATTG GAATGTACGC TACAAACAAA AGTTTGGCTT TATCTTCATT ATCTGCGCCT CTGGTAGGAC TCATGCTGAG ATGCTCCATG AGTTAAAGGA AAGGTATGAA AATAGGCCGA TAGTGGAGCT TGAGAATGCT GCTATGGAAC AAATGAAAAT AACAGAGCTA CGAATTGCTA AGCTCTACTC CGATAAGGCT AGAGTTGTAT CTGAAACTGA CAGCTCTAGC TCTCCTATTT CCACAAAACC TCAAGATCGT CTGAGAATCA TTGGAGGGCA TTTGAATGTT GCAGCTGAAG CAAAAACTCC CAAGAGAAGT AGGCCACCAA TCACGACTCA TGTCTTAGAC GTCTCACGTG GTGCTCCAGC TGCAGGTGTT GAAGTGCACT TAGAAGTGTG GAGTGGTACT ACCGGTCCTT CCTTTGGTCA TGGAGGTGGT GGTGTCTGGT CCAGTGTGGG CACTTCAGCT ACTGATCAAG ATGGGCGCAG TGGGCCACTG ATGGATTTGG TTGAGGCTTT GAATCCAGGG ACATATAGAA TAAGCTTCAA CACTGCAAAG TATTGCCCAG GCTGCTTCTT TCCCTATGTT TCGATTGTAT TTCAGGTTAC AGAATCTCAG AAATGGGAGC ATTTCCATGT CCCACTGTTG CTTTCACCAT TTTCTTTCAC CACATACCGT GGGAGCTAGA |
| Length | 980 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 17356294.. 17357614 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G58220.1 |
| Description | transthyretin-like protein |
| TAIR curator summary | Encodes a transthyretin-like S-allantoin synthase protein that catalyzes two steps in the allantoin biosynthesis pathway by acting as a hydroxyisourate hydrolase and a 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) decarboxylase. Two alternatively spliced versions of the transcript give rise to a longer peroxisomally-targeted protein (AT5G58220.1 (called TTL1-)) and a slightly shorter cytoplasmic protein (AT5G58220.3 (called TTL2-)). Both have roughly equivalent enzymatic activity in vitro, but, allantoin biosynthesis is believed to occur in the peroxisome suggesting that the cytosolic form may participate in a different process. |
| Alias | [ALNS][TTL][allantoin synthase][transthyretin-like protein] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 10.583 |
Ahg950858 | histone deacetylase 5 |
| 12.4097 |
Ahg481481 | Transmembrane proteins 14C |
| 13.1909 |
Ahg482551 | Chaperone DnaJ-domain superfamily protein |
| 19.8997 |
Ahg332986 | ATP-dependent caseinolytic (Clp) protease/crotonase family protein |
| 21.2132 |
Ahg937567 | aldehyde dehydrogenase 10A9 |
| 21.3073 |
Ahg487926 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
| 21.4476 |
Ahg946285 | Pentatricopeptide repeat (PPR) superfamily protein |
| 21.5407 |
Ahg937750 | |
| 26.7208 |
Ahg490898 | Cystathionine beta-synthase (CBS) family protein |
| 31.9687 |
Ahg899968 | Protein of unknown function (DUF2012) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
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| The four seasons |
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| Growth Chamber expression |
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