Detail



ID : Ahg496013

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496013|fgenesh2_kg.8__1829__AT5G58900.1
Sequence
AAGTTTATAA TTTGGTTTCT GGTTTTAGTT TTCTTTCCAT TTATGGGCTC ATTTGCTTCT TCTTGCACGT TATAGTTTTC CTAATTTTTT TTTCATTTTC TGTAGCCATA TGTTTATTTT CCCGAGAAAT ATTATCCACA CCCAGCTTTT TAAATCTCTT TAACTCTGAG TCTCTGATAC TTAAATACCA CTCATGCTTA TTAGCTCCAC CAAATCTGGA AAACCAATAG ATTCGTTTTG CAAAATCTCA GAGCTACCCT AAAAATTCTC TCTTTTTGAC TCACTAACCA GATTTCGACT AGATTTTACT CAATTCATTT GCAAAAGGAT AAAACTTTTA TAGATTCCTT GAAGTGGGTG TGGGTCTAAG CAATGCTTCA AAGAAATTCC TATGGTTTCT TCTCTAAACA AAATAAAAGT GAAGTATCAT TTGATAGTGA TTTTTGTGTT CTTCCTTTGA TTCTCTTATC TCTTTCTTCC CATCAATAAA CCAAAAAAAA TTCGTAAATC CGTTGACCTT TGTCGGTATG ATTTGTTCTT ACTTATCGTA AAAAAAACAG AGCTAGGTTT TAGTTTTCGG ACATGGAGGT TCTGAGGCCG ACGACGTCAC ACGTGTCCGG TGGGAACTGG CTTATGGATG AGACTAAGAG CGCCGTCGCA GCTTCTGGCG AAGGTGCCAC GTGGACGGCG GCGGAGAACA AGGCATTCGA GAATGCTTTG GCGGTTTACG ACGACAACAC TCCTGATCGG TGGCAGAAGG TGGCGGCGGT GATTCCGGGG AAGACCGTGA GTGACGTCAT TAGACAGTAC AACGATCTGG AAGCTGACAT CAGCAGCATC GAGGCCGGTT TAATCCCGGT CCCGGGTTAC ATCACCTCGC CGCCTTTCAC TCTAGATTGG GCCGGTGGCG GTTGTAACGG GTTCAAACCG GGTCATCAGG TTTGTAACAA ACGGTCTCCG GCCGGTAGAT CGCCGGAACT GGAGAGGAAG AAAGGCGTTC CTTGGACGGA AGAAGAACAC AAGCTATTTC TAATGGGTTT GAAGAAATAC GGGAAAGGAG ATTGGAGAAA CATATCTCGG AACTTTGTGA TAACGCGAAC GCCAACACAA GTCGCTAGCC ACGCCCAAAA GTACTTTATC CGGCAACTTT CTGGCGGCAA GGACAAAAGA CGAGCAAGCA TTCACGACAT AACCACCGTG AATCTCGAAG ACGAAGCCTC TTTGGAGACC AATAAGAGCT CCATTGTTGT TGGAGAGCAG CGTTCAAGGC TAACCGCATT TCCTTGGAAC CCAACGGATA ACAATGGAAC GCATGCAGAT GCTTTCAACA TAAGGATTGG AAACGCTATT AATGGCGTTC ACTCGTACGG TCAGGTTCTG CTTGGAGGGT TTAACAATGC AGATTCTTGC TATGACGCGC AAAACACAAT GTTTCAACTA TAGCTAATGG ATCATGCATC TCTCTAATTA AAGGGTGTAA GTGAAAATCT TAATTTTTCA TATGGACGAA ACAATCATAT TTGGTAACTG TACAATAAAC GTCCATTGTT TTAATTCCAA ATTGAAATAG TAGATAAAAG TCTCGTGAC 
Length1589
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17677600.. 17679638
Download Sequence
A.thaliana
AGI-codeAT5G58900.1
DescriptionHomeodomain-like transcriptional regulator
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
20.5913 Ahg928205 germin-like protein 8
21.5174 Ahg486755 Adenine nucleotide alpha hydrolases-like superfamily protein
39.95 Ahg473790 AP2/B3-like transcriptional factor family protein
40.398 Ahg312429 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
42.3556 Ahg910866 Protein of unknown function (DUF707)
45.0777 Ahg489834 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
50.6853 Ahg925479 chloroplast ribosomal protein S14
55.3173 Ahg497081
56.0803 Ahg491275
58.9406 Ahg490564 Plastid-lipid associated protein PAP / fibrillin family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression