Detail



ID : Ahg496056

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|496056|fgenesh2_kg.8__1872__AT5G59290.1
Sequence
GTTCAGACAC CTGGGACTAT AAGTAGACGA TCTCTCCTTG TCTTAATCTT CTCATCAGAT CAGAAGATTT TGGTTCTAAA TCTTGTCTTC TTCCATTCCC CGAAGCTTCT GGATTGAGAT CTCTGAAGCA ATGGCAGCTA CAAGTGAGAA ACAGAACAGC ACAAAGCCTC CTCCTTCTCC TTCTCCTCTC CGCAATTCCA AGTTTTGTCA GTCCAATATG AGGATCTTGA TCTCTGGAGG AGCTGGGTTC ATTGGTTCTC ACTTGGTTGA TAAGCTTATG GAAAATGAGA AGAATGAGGT GATTGTTGCT GATAACTATT TCACTGGATC AAAAGAAAAC CTCAAGAAGT GGATCGGTCA CCCGAGGTTT GAGCTTATTC GTCACGATGT TACGGAGCCT TTGTTGATCG AGGTTGATCG GATTTACCAT CTTGCTTGTC CTGCCTCTCC TATCTTCTAC AAGTACAACC CTGTTAAGAC AATCAAGACC AATGTGATCG GTACACTCAA CATGCTAGGT CTTGCCAAGC GTGTTGGAGC AAGAATTTTA CTAACCTCAA CCTCGGAAGT GTATGGAGAT CCTCTCATCC ACCCTCAACC AGAGAGCTAC TGGGGAAATG TCAACCCAAT TGGTGTACGG AGTTGCTATG ACGAAGGCAA GCGTGTAGCC GAGACCTTGA TGTTTGACTA CCACAGACAA CACGGCATTG AAATCCGCAT TGCTAGAATC TTCAACACTT ATGGTCCTCG AATGAACATT GATGATGGGC GTGTGGTGAG CAACTTCATT GCTCAAGCAC TCAGAGGTGA GGCATTGACA GTTCAGAAAC CGGGGACACA GACCCGCAGT TTCTGTTATG TCTCCGACAT GGTGGATGGA CTTATCCGTC TTATGGAAGG GGATGATACT GGCCCTATCA ACATCGGTAA CCCAGGTGAA TTCACAATGG TGGAACTTGC TGAGACGGTT AAGGAGCTTA TTAACCCAAG CATAGAGATA AAGATGGTGG AGAACACACC GGACGATCCA AGACAGAGGA AACCAGACAT TAGTAAGGCC AAAGAAGTGT TGGGTTGGGA GCCAAAGGTG AAGCTCAGAG AAGGACTTCC TCTCATGGAA GAAGATTTCC GACTAAGGCT CAACGTCCCC AAAAACTAAA ACCGGTTTTG AGTTAACGAG TTTTCAGCTG TTGCGTTATA TAATGGTGCT ATTATACTAC AAAGTGGTGG GTTTGGTTTC ATGTGTTATT CATATTGCTT TTTGTTCTTA GAGAAATAAG TTGGGAAAGG GTCTCTTTTG TGAGGAACGG CTCTTTCTTT GTTTTTCAGT ATGTTGTGTT ATGGTTATTG TTTTGTGGTT TTAATGAAAT TTGTTCAC 
Length1378
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17891359.. 17893989
Download Sequence
A.thaliana
AGI-codeAT5G59290.2
DescriptionUDP-glucuronic acid decarboxylase 3
TAIR curator summaryEncodes an isoform of UDP-glucuronic acid decarboxylase, which is predicted to be cytosolic by PSORT. This enzyme produces UDP-xylose, which is a substrate for many cell wall carbohydrates including hemicellulose and pectin. UDP-xylose is also known to feedback regulate several cell wall biosynthetic enzymes.
Alias[ATUXS3][UXS3][UDP-glucuronic acid decarboxylase 3]
Gene coexpression
MR
MR Locus Description
15.8114 Ahg893150 beta-6 tubulin
21.3542 Ahg475696 cytosolic NADP+-dependent isocitrate dehydrogenase
22.4499 Ahg477915 Heavy metal transport/detoxification superfamily protein
24.8193 Ahg923651 O-fucosyltransferase family protein
26.8328 Ahg483883 squamosa promoter binding protein-like 1
27.6767 Ahg333044 early nodulin-like protein 19
36.2215 Ahg474322 myrosinase-binding protein 2
40.6202 Ahg927738 Regulator of chromosome condensation (RCC1) family protein
42.9535 Ahg478170 Leucine-rich repeat protein kinase family protein
43.2666 Ahg491000 beta-galactosidase 3
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression